Paenibacillus sp. FSL H7-0357: H70357_12880
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Entry
H70357_12880 CDS
T03358
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paeh
Paenibacillus sp. FSL H7-0357
Pathway
paeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70357_12880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeh03019
]
H70357_12880
03009 Ribosome biogenesis [BR:
paeh03009
]
H70357_12880
Enzymes [BR:
paeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H70357_12880
Messenger RNA biogenesis [BR:
paeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H70357_12880
Ribosome biogenesis [BR:
paeh03009
]
Prokaryotic type
rRNA helicases
H70357_12880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
AAA_19
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AIQ17456
UniProt:
A0A089HZN4
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All DBs
Position
2858472..2860118
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AA seq
548 aa
AA seq
DB search
MKTFAEFGLEPKVLQAITELGFEEATPIQEQAIPLALTGADLIGQAQTGTGKTAAFGIPL
ISKIAREEEKILALVMTPTRELAIQVAEEIGKLTRFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTIVLDEADEMLDMGFMEDIQTILKLVPEERQTML
FSATMPPNIQRLAQQFLKNPQHVSVIPKQISAPLIDQAYIEVPERQKFEALSRLIDMESP
DLAIVFGRTKRRVDELAEGLQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHLHLIERVTR
HRITRKPLPTMAEAIEGKQRITAERLLAMVEEGGELNEYKGIAIQLLEQYDSVQLLSAAM
KLLTGDNKDTQVELTPEDPIRAKRRGGKNDIRSGRKPNGGYGGNRTGSGTGGGYKGNRDS
GSSYGGGYKGNRDSSSGSTTRGGYSSGYGSNSSSGGYKGNRDSSADRKPSARPSSTSTRP
AKREDYDI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaattcggcttggagccaaaagtacttcaagcaatcacagagcta
ggatttgaggaagcaacacccattcaggagcaggcaatcccgctcgcgctgactggagca
gacttgatcggccaggcacagaccggtacgggcaaaacagccgctttcggtattcccctc
atctccaaaattgctcgggaagaagaaaaaatcctggcgctagttatgacgccaacccgt
gagcttgcgattcaggttgctgaagaaatcggcaaactgacccgcttcaagggtctgcgt
tcactggctatttacggcggacaggatatcggccgtcaaatccgcgggttgaagaagaaa
ccacagatcattatcggaacacctggacgccttctggatcacatcaaccgcaagacgatc
cgtcttgatgacgtgcagaccatcgtattggatgaagctgatgaaatgctggatatgggc
ttcatggaagacatccagacgatcctcaagctcgtgccggaagaacgtcaaaccatgttg
ttctcagctacaatgcctcctaacattcaacgtctcgcccaacagttcctgaagaacccg
caacatgtttccgtaattccaaaacaaatcagcgctccattgattgaccaagcctatatc
gaagttcctgagcgccagaagtttgaagcactgagccgtctgatcgatatggagtcccca
gatttggcaatcgtcttcggacgtaccaaacgccgggttgacgagcttgccgaaggcctc
cagaaacgcggatattctgctgacggattgcatggcgacttgtcccagaaccaacgtgat
gcggttatgcgtaaattccgtgacggcagcattgacgtgcttgtagctactgacgtagca
gcgcgcggactcgacgtttccggtgtaacacatgttatcaactttgaccttccgcaagat
ccggaaagttatgtacaccgtatcggccgtacaggccgcgcaggtaaagaaggaacagca
tggtcattcgtgactccgcgtgaaatggaccacctgcatctgatcgagcgtgtaacccgt
caccggattacccgcaaaccgctgccaacaatggctgaggcaattgaaggcaaacaacgc
atcactgcagaacgtctgctggcaatggttgaagaaggcggcgagctgaacgaatacaaa
ggcatcgcgattcaattgctggagcaatatgattctgtacaactgctctccgcagcaatg
aaattgcttaccggcgacaacaaggatacacaggttgaattgacaccggaagatccgatc
cgcgcaaaacgccgcggcggcaagaatgacatccgtagcggccgcaagcctaatggcggc
tacggcggcaaccgcactggttccggcacaggcggtggctataaaggcaaccgtgatagc
ggcagcagctatggcggcggctataaaggcaaccgcgacagtagcagcggcagcacaacc
cgtggtggttacagcagcggctacggcagcaacagcagcagcggcggttacaaaggcaac
cgcgacagcagtgccgaccgcaaaccatcggcgcgtccaagcagcacaagtactcgtccg
gctaaacgcgaagattacgacatttag
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