KEGG   Paenibacillus sp. FSL H7-0357: H70357_15290
Entry
H70357_15290      CDS       T03358                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
paeh  Paenibacillus sp. FSL H7-0357
Pathway
paeh02024  Quorum sensing
paeh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:paeh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H70357_15290
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    H70357_15290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paeh03019]
    H70357_15290
   03036 Chromosome and associated proteins [BR:paeh03036]
    H70357_15290
Messenger RNA biogenesis [BR:paeh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     H70357_15290
Chromosome and associated proteins [BR:paeh03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    H70357_15290
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Flag1_repress
Other DBs
NCBI-ProteinID: AIQ17881
LinkDB
Position
complement(3398951..3399172)
AA seq 73 aa
MESLKLQERLLNQCISTKVPVTIFTTNGVKMQGIVTSYDAYTITLHGQGDGRQNVLFKSA
VSTVVPLKPVSLK
NT seq 222 nt   +upstreamnt  +downstreamnt
gtggaaagtctaaaattacaggaacgtttgttgaaccaatgtatttcaacaaaggtgccc
gtgacgatttttacaaccaacggagttaaaatgcagggaattgtgacctcatacgacgct
tacacgatcaccttgcacggacagggtgacggcaggcaaaatgtgctctttaaatcggca
gtttccacggttgtgccgcttaagcccgtctcacttaaataa

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