Paenibacillus sp. FSL H7-0357: H70357_21400
Help
Entry
H70357_21400 CDS
T03358
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
paeh
Paenibacillus sp. FSL H7-0357
Pathway
paeh02020
Two-component system
paeh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paeh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H70357_21400
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H70357_21400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paeh03021
]
H70357_21400
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paeh02035
]
H70357_21400
Transcription machinery [BR:
paeh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H70357_21400
Bacterial motility proteins [BR:
paeh02035
]
Flagellar system
Flagellar assembly proteins
Stator
H70357_21400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
PhyR_sigma-like
CtpB_N-like
Sigma70_ECF
HTH_23
HTH_16
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AIQ18972
LinkDB
All DBs
Position
complement(4742227..4743015)
Genome browser
AA seq
262 aa
AA seq
DB search
MNEHKASQSETDGLWEQWKEQGNPEAKKKLIENYLHIVDYVSSRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFQTYASWRVRGAILDSLRQSDWVPRSVREKAKKIEDAYQQ
LEQKYLRSVSDEEMSEYLNVTETEFQNMLQDVAVMSLCSLEDPIREEESETRLSILVDDK
AKNPDRKVNEFYLRDTLTKGIEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKNRDLLMQND
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcataaagcttctcaatcggaaactgacgggctctgggaacagtggaaagag
caaggtaatcccgaagccaaaaaaaagctgattgagaattacctccatattgtagattac
gtgtccagccgcttggcagtcggattacccaaaaatgtatctaaagatgatttggccagc
aacggtgtcatgggtttgattgatgccatcgagaaattcgactataagcggggactccag
tttcagacttatgcttcctggcgtgtgcgtggagcgattcttgattcattgcgccagagc
gactgggttcccaggtccgtgagggagaaagccaaaaaaatcgaagatgcttaccagcag
ctggagcagaaatacctaagatcagtcagtgacgaggaaatgagcgaatatctgaatgtt
acggagacggagtttcagaatatgctgcaggacgtagcagtaatgtcgctctgttcacta
gaggatcctattcgcgaggaagaatcagagacacgcttgtccatcctggtggatgataaa
gccaaaaatccggatcgcaaagtaaatgagttttatttgcgcgatacgctcactaaaggc
atcgagaaactaacggtgaaagaaaggaccgttgtgtcccttttatattatgaagattta
tcattaagcgagatcgccgaggtgatgtcactgtcgccttcacggatttcgcagcttcat
tcaaaagctattttgcggctgagaggaacacttgagaaaaatcgcgatcttctcatgcaa
aacgattaa
DBGET
integrated database retrieval system
