Pseudomonas aeruginosa PAO1-VE2: N296_1496
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Entry
N296_1496 CDS
T03170
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
paei
Pseudomonas aeruginosa PAO1-VE2
Pathway
paei02020
Two-component system
paei02025
Biofilm formation - Pseudomonas aeruginosa
paei02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
paei00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N296_1496
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N296_1496
09142 Cell motility
02040 Flagellar assembly
N296_1496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paei03021
]
N296_1496
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
paei02035
]
N296_1496
Transcription machinery [BR:
paei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N296_1496
Bacterial motility proteins [BR:
paei02035
]
Flagellar system
Flagellar assembly proteins
Stator
N296_1496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_30
UPF0122
GerE
MarR_2
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
AGY68113
LinkDB
All DBs
Position
1584819..1585538
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AA seq
239 aa
AA seq
DB search
MYSKAQAQNSQEQLIQRYAPLVKRIAYHLLGRLPASVQVEDLMQAGMIGLLEAAKKYDAG
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVTDAIRAIEARTGRDAKDHEVAA
ELQLSLEDYYGILSDTQGSRLYSFDDLLQDGEHGLPEDTSLSHNEPIHGLLDERFQAALA
DAIAKLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRARLADWRSA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcaaggcgcaagcgcagaactcccaggagcaactgatccagcgttacgcacca
ctggtcaagcgcatcgcctatcacctgctcggccgcctgccggccagcgtgcaggtggag
gacctgatgcaggccggcatgatcggcctgctcgaggccgcgaagaaatacgacgccggc
aagggcgccagcttcgagacctatgccggcatccgcatccgcggggccatgctcgacgag
gtccgcaagggcgactgggcgccgcgttcggtgcaccgcaacacgcgcatggtgaccgac
gcgatccgcgcgatcgaggcgagaaccgggcgcgacgctaaagatcacgaagttgctgcc
gaactccaattgagcctcgaagattactacggcatcctcagcgacacgcagggcagccgc
ctgtacagcttcgacgacctgttgcaggacggcgaacatggattgccggaagacaccagc
ctcagtcacaacgaaccgatccacggcctgctcgacgaacgtttccaggcggccctggcg
gatgccatcgccaagttgccggagcgcgagcgcctggtgctggcgttgtattacgacgag
gaactcaacctcaaggagatcggcgaggtactgggcgtcagcgaatcgcgggtcagccag
ttgcacagccagtgcgccgcgcgtttgcgcgcgcgcctggccgattggcggtcggcctga
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