Pseudomonas aeruginosa PAO1-VE2: N296_1708
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Entry
N296_1708 CDS
T03170
Symbol
clpV
Name
(GenBank) type VI secretion ATPase, ClpV1 family
KO
K11907
type VI secretion system protein VasG
Organism
paei
Pseudomonas aeruginosa PAO1-VE2
Pathway
paei02025
Biofilm formation - Pseudomonas aeruginosa
paei03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
paei00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N296_1708 (clpV)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
N296_1708 (clpV)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
paei02044
]
N296_1708 (clpV)
Secretion system [BR:
paei02044
]
Type VI secretion system
Imp/Vas secretion system core components
N296_1708 (clpV)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
Clp_N
AAA_7
TniB
NACHT
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_24
AAA_25
Hpr_kinase_C
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AGY67581
LinkDB
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Position
1810752..1813379
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AA seq
875 aa
AA seq
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MINVDLQQLIQALDADTRRDLEGSAERCVARGGSKVLVEDLLLGLLERPQGLLARALQDA
AVDAGELNAALQARGEHSASRNPVFAPELVQWLQDALLLANLELGRSQIDQAALILALLR
NPLRYAGSRYQPLLARLDIERLKDFALSQPLEGAPSGKPGGGESLLQRFTHNLTQQARDG
KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPPALRDV
ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPTILFIDEAHTLIGAGGQAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPSVAEAVTILRGLAR
VYEESHGIYLRDDAVVAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLERL
RGELAEGERQRQALRRDAEAGLPIDHDALQALEERLAQAESERHVQEDQWSRQRELAERL
LALRQQLARAREANREEQGSEADAEAFPADEHGGVEALEKALHETRQALADAQAQGRLVS
FEVCPRLVAEVIGAWTGVPVEQLAREHNAKVMGFADDLRTRIRGQEQAVSALDRAMRATA
AGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGERFITTINMSEFQEKHTVSRLIG
APPGYVGYGEGGMLTEAVRQKPYSVILLDEVEKADPDVLNLFYQIFDKGVANDGEGREID
FRNTLILMTSNLASEHIAALCQDGARPSAELLEETIRPALSRHFKPALLARMRVVPYYPV
GGPVLRELIEIKLQRLGERLARRQLAFDYSQALVGHLAERCTQSDSGARLIDHLLDTHLL
PLVADRLLEAMARDERLERVHATLGEHGRVLCEFA
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactgattcaggcgctggatgccgacacccggcgcgac
ctcgaaggctcggccgagcgctgcgtagcccgtggcggcagcaaggtactggtggaggac
ctgttgctgggtctgctggagcgtccccagggactgctggcgcgcgccctgcaggatgcc
gcggtggacgccggcgaactcaacgccgcgttgcaagcgcggggcgagcacagcgcctcg
cgcaatccggtgttcgcgcccgagctggtgcagtggctgcaggatgcgctgttgctggcc
aacctcgaactgggccgtagccagatcgaccaggcggcattgatcctggccctgctacgc
aacccgttgcgctatgccggcagccgctaccagccgctgctggcgcggctcgacatcgag
cggttgaaggatttcgcgctctcgcagccgctggagggcgcgcccagcggcaagccgggc
ggcggcgagtccctgttgcagcgtttcacccacaaccttacccagcaggcgcgcgacggc
aagctcgatccggtgctctgtcgcgacggggctattcgccagatggtcgacatcctggcc
cgtcggcggaaaaacaaccccatcgtggtcggcgaggctggcgtcggcaagaccgccatc
gtcgaaggcctggcctcgcggatcgccgcaggggaagtgccgccggcgctgagggacgtc
gagctgttgtccctcgacatgggcctgttgcaggccggtgccagcgtgaagggcgagttc
gagcggcgcctgaaaggcgtcatcgacgaagtgaaggcagcgcccaggccgaccatcctg
ttcatcgacgaggcccatacgctgatcggcgcgggcggtcaggccggcggctcggatgcc
gccaacctgctcaagccggccctggcacgtggcgagttgcgcaccatcgcggcgacgacc
tgggccgaatacaagaagtatttcgagaaggacccggcgctggcccggcgcttccagccc
gtgcagttgcatgagccgagcgttgccgaggcggtgacgatcctgcgtggcctggcccgg
gtttacgaggaaagccacggtatctacctgcgcgacgacgcggtggtggccgccgccgaa
ctgtccgcccgctacctggcgggtcgccagttgccggacaaggccgtcgacgtcctcgac
accgcctgtgcgcgggtgcgcatcagcctggcggcggcgccggagagcctcgagcgcctg
cgcggcgagctggccgaaggcgagcgccagcgccaggccctgcgccgcgatgccgaggca
ggcctgccgatcgaccacgatgccctgcaggcgctggaggagcgcctggcccaggcggaa
agcgagcggcacgtacaggaggaccagtggagccgccagcgcgaactcgccgagcgcctg
ctcgccctgcgccagcaattggccagggcccgcgaggcgaaccgggaagagcagggcagc
gaggcggacgcggaggctttcccggccgacgagcatggcggtgtcgaagccttggaaaag
gcccttcacgaaacccgccaggcactcgccgatgcccaggcccaggggcggctggtcagc
ttcgaggtctgcccgcgcctggttgctgaggtgatcggcgcctggaccggcgtaccggtg
gaacaactggcgcgggaacacaacgccaaggtgatggggttcgccgacgacctgcggacg
cggatccgtggccaggaacaggcggtcagcgccctggaccgcgcgatgcgcgccaccgcg
gccgggctgaacaagcccgatgcgccggtcggcgtgttcctgctggtgggcccgagcggg
gtgggcaagaccgagaccgcgctggcgctggccgacctgctgtatggcggcgagcgtttc
atcaccaccatcaacatgtccgagttccaggagaagcacaccgtctcgcgcctgatcggc
gcgccgcccggctatgtcggctatggcgagggtggcatgctcaccgaggcggtacgccag
aagccctattcggtgatattgctggacgaggtggagaaggccgatccggacgtgctcaac
ctgttctaccagatcttcgacaagggcgtggccaacgatggcgaagggcgcgagatcgat
ttccgcaataccttgatcctgatgacctccaacctcgccagcgagcacatcgccgcgctt
tgccaggacggcgcgcggccttccgccgaactcctggaggaaaccatccggccggcgctc
agccggcatttcaagccggcgctgctggcgcgcatgcgcgtggtgccttactacccggtg
ggcggcccggtactgcgcgagctgatcgagatcaagctgcaacgcctcggcgagcgcctg
gcgcgccgtcaactggctttcgactacagccaggcgctggtgggccacctggccgagcgt
tgcacccagagcgacagcggcgcacggttgatcgaccacctgctggacacgcacctgctg
ccgctggtggccgaccgtttgctggaagcgatggcgcgcgacgagcgtctcgagcgggtc
catgcgacgctgggcgagcacgggcgcgtgctctgcgagttcgcctga
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