Pseudomonas aeruginosa PAO1-VE2: N296_3066
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Entry
N296_3066 CDS
T03170
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
paei
Pseudomonas aeruginosa PAO1-VE2
Pathway
paei03030
DNA replication
paei03430
Mismatch repair
paei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N296_3066 (holB)
03430 Mismatch repair
N296_3066 (holB)
03440 Homologous recombination
N296_3066 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paei03032
]
N296_3066 (holB)
03400 DNA repair and recombination proteins [BR:
paei03400
]
N296_3066 (holB)
Enzymes [BR:
paei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N296_3066 (holB)
DNA replication proteins [BR:
paei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N296_3066 (holB)
DNA repair and recombination proteins [BR:
paei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N296_3066 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
AAA_5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AGY67977
LinkDB
All DBs
Position
complement(3320059..3321045)
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AA seq
328 aa
AA seq
DB search
MADIYPWQQALWSQLGGRAQHAHAYLLYGPAGIGKRALAEHWAAQLLCQRPAAAGACGEC
KACQLLAAGTHPDYFVLEPEEAEKPIRVDQVRDLVGFVVQTAQLGGRKVVLLEPAEAMNV
NAANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQACPLPGAAASLEWLARALPD
EPAEALEELLALSGGSPLTAQRLHGQGVREQRAQVVEGVKKLLKQQIAASPLAESWNSVP
LPLLFDWFCDWTLGILRYQLTHDEEGLGLADMRKVIQYLGDKSGQAKVLAMQDWLLQQRQ
KVLNKANLNRVLLLEALLVQWASLPGPG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatctatccctggcagcaggcgctctggagccaactgggcggccgcgcccag
cacgcccacgcctatctgctctacggtcccgccgggatcggtaagcgtgccctggccgag
cattgggccgcccaactgctctgccagcggcctgccgccgctggcgcatgcggcgagtgc
aaggcctgccagttgctggccgccggtacccatccggactacttcgtgctggagccggag
gaggcggagaaaccgatccgggtcgatcaggtccgcgacctggttggcttcgtggtgcag
accgcgcaactgggcgggcgcaaggtcgtgttgctcgaacccgccgaggcgatgaacgtg
aacgccgccaacgccctgttgaaaagccttgaagagccgtcgggcgatactgtgctgctg
ctgatcagccaccagcccagccgcctgttgccgaccatcaagagccgctgcgtgcagcag
gcctgccctttgccgggcgcggcggcgagtctggaatggctggcgcgggccctgcccgac
gagccggccgaggccctggaggaactgttggcgctttccggcggctcgccgctcaccgcc
cagcgcctgcacggccagggcgtgcgcgagcagcgcgcgcaggtggtcgagggggtgaag
aagctgctcaagcagcagatcgccgccagcccactggccgaaagctggaacagcgtgccg
ttgccattgctcttcgactggttctgcgactggacgctgggcatcctgcgctaccagttg
acccacgacgaggaggggctggggttggccgacatgcgcaaggtgatccagtacctgggc
gacaaatccgggcaggccaaggtgctggccatgcaggactggctgctgcaacagcggcag
aaagtgttgaacaaggccaacctcaaccgtgtcctgcttctcgaagccctgctggtgcag
tgggcaagcctgcccgggccgggctag
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