Pseudomonas aeruginosa PAO1-VE2: N296_4422
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Entry
N296_4422 CDS
T03170
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
paei
Pseudomonas aeruginosa PAO1-VE2
Brite
KEGG Orthology (KO) [BR:
paei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paei03400
]
N296_4422 (sbcD)
DNA repair and recombination proteins [BR:
paei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N296_4422 (sbcD)
Archaeal homologous recombinant proteins
N296_4422 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AGY62999
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Position
4795484..4796713
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AA seq
409 aa
AA seq
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MRLIHTSDWHLGQTLHGQDRDHEHARFLDWLLRQLEEQRADVLLIAGDIFDTINPPLKAQ
ERLYDFIVSAHRRLPRLEIVMIAGNHDSGARIELPAPLMKRLNAHAIGRIGWIDESLDSD
RLLLPLHDADGQVAAWCLALPFLRPAEVTGGGLGDDYLAGIRQVHERLVAAAHARRTPGQ
ALVAVSHAHMAGGSVSEDSERNLIIGNVEALPASLFPEQIAYVALGHLHKPQKVAGQERI
RYSGSPLPLSFAEVNYRHQVLLVTLEGERLKDVQSLPVPRAVELLRIGPAPLGEVLDRIG
ELAEADLLNEQRPWLEVRVMLDQPQPDLRQQVESALLGKACRLVRIASEYQRRDEEQAPL
LGLDQLNPQELFSRAWESAYGSGPDAQALDDFASLLQSVELATEEPPGK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcatacatacctccgactggcacctgggccagaccctgcacggccaggaccgc
gatcatgagcatgcgcgcttcctcgactggctgctgcgccagctggaagagcagcgcgcc
gatgtcctgctgatcgcgggcgatatcttcgacacgatcaatccaccgctcaaagcccag
gagcgcctctacgacttcatcgtcagcgcccatcgacggctgccgcggctggagatcgtg
atgatcgcaggcaaccacgactccggcgcgcgcatcgaactgcccgctccgctgatgaaa
cgactgaacgcccatgccatcggccgaatcggctggatagacgaaagcctcgatagcgat
cgcctgctgctgcccctgcacgacgcggatggccaggtcgccgcctggtgcctggccctg
cccttcctgcgtcccgccgaagtcaccggaggcgggctcggcgacgattacctggccggt
atccgccaggtgcacgaacgcctggttgccgccgcgcacgcccgtcgcacgccgggacag
gcactggtcgccgtcagccacgcacacatggccggcggctcggtttccgaagactccgag
cgaaacctgatcatcggcaacgtcgaagcgctgcccgccagcctgtttccggagcagatc
gcctacgtagccctcggtcatctgcacaagccacagaaagtcgccggacaggagcgcatt
cgctatagcggctcgccgctgccgctgtccttcgccgaagtgaactatcgccaccaggtc
ctcctcgtcaccctggaaggtgagcgcctgaaggatgtacagagtcttccggtgccacgc
gcggtggaactgttgcgcatcggccccgcgcctcttggcgaggtgctcgatcgaatcggc
gaactggccgaggccgacctgctgaacgaacagcggccctggctggaagtccgcgtcatg
ctggatcagccgcaaccggacctgcgccagcaggtcgagagcgccctgctgggcaaggct
tgccgtctggtgcgcatcgccagcgagtaccagcgccgcgacgaagagcaggcgccgctg
ctcgggctcgaccaactcaacccccaggaactgttcagccgcgcctgggaaagcgcctat
ggctccggcccggatgcgcaggcgctggatgacttcgccagcctgctgcaaagcgtcgaa
ctggccaccgaagagcccccggggaaataa
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