Paenibacillus sp. FSL H7-0737: H70737_10220
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Entry
H70737_10220 CDS
T03359
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70737_10220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paej03019
]
H70737_10220
03009 Ribosome biogenesis [BR:
paej03009
]
H70737_10220
Enzymes [BR:
paej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H70737_10220
Messenger RNA biogenesis [BR:
paej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H70737_10220
Ribosome biogenesis [BR:
paej03009
]
Prokaryotic type
rRNA helicases
H70737_10220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AIQ23191
UniProt:
A0A089IFQ4
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All DBs
Position
2364483..2366129
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AA seq
548 aa
AA seq
DB search
MKTFAEFGLEPKVLQAITELGFEEATPIQEQSIPLALTGSDLIGQAQTGTGKTAAFGIPL
ISKINREDEKILALIMAPTRELAIQVSEEIGKLSRFKGLRSLAIYGGQDIGRQIRGLKKK
PQIIIGTPGRLLDHINRKTIRLDDVQTVVLDEADEMLDMGFMEDIQTILKLVPEERQTML
FSATMPPNIQRLAQQFLNNPQHVSVIPKQISAPLIDQAYVEVPERQKFEALSRLIDMESP
ELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHLHLIERVTR
HRITRKPLPTMAEAIEGKQRVTAERLLEMVENGELNEYKGISIQLLEQYDSVQLLSAAMK
LLTGDKKDSAIELTPEDPIRAKRRGGKNDIRSGRKPNGGYGGNRGTSGGSTGGYRGNRDN
NGGGSRGGYSSGGSNYGSGSGGYGGGYKGNRDGAAGRDGGANRSADRKPSTRPSSTSTRP
AKREDFDN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaatttggcttggagccaaaagtgctacaagcaatcacagagtta
ggatttgaggaggcaacaccgatacaggagcagtcaattccattggcattgactgggtcg
gatctgatcggtcaagcacagactggtacaggtaagactgctgcttttggtatccccctc
atttcgaagattaatcgcgaagacgaaaaaattctggcacttatcatggcaccaacacgt
gagttggccattcaagtatcagaagaaatcggtaagctaagccgttttaaaggtcttcgt
tcgttggcaatttatggcggacaagatattggtcgccaaatccgtggtcttaagaagaaa
ccacaaattattattggtacacctggacgtttgcttgaccatatcaaccgtaaaaccatt
cgtttggatgatgttcaaactgttgtattggatgaagcagatgaaatgctggatatgggc
tttatggaagatattcagacaatcctcaagctcgttcctgaagaacgtcaaactatgttg
ttctcggctacaatgcctccaaacattcaacgtcttgcacagcaattcctgaacaacccg
caacacgtctccgttattccgaaacaaatcagtgctccgctgattgatcaagcatatgtt
gaagtacctgaacgtcaaaagttcgaagcgcttagtcgtttgattgatatggaatcacct
gagcttgcaatcgtgttcggacgcacaaagcgccgggttgatgagcttgcagaagctttg
caaaaacgtggatactcagctgatggattacatggtgacctgtctcagaaccaacgtgat
gctgtaatgcgtaaattccgtgatggcagcattgatgtgctggtagctactgacgtagcg
gctcgtggtttggacgtatctggcgttactcatgtaattaactttgacttgccgcaagat
ccagaaagctatgtacaccgtatcggtcgtactggtcgcgctggtaaagagggtacagct
tggtctttcgttactccacgcgaaatggatcacctgcatttgatcgaacgcgttactcgt
caccgtattactcgtaaaccattgccaactatggctgaggctattgaaggtaaacaacgc
gtaacagcagagcgcttgcttgaaatggttgagaacggtgaattgaatgagtacaaaggt
atttctattcaattgcttgagcaatatgattccgtacaattgctgtcagctgcaatgaag
cttctgactggtgataagaaggattctgcaattgaattgactcctgaagatccaatccgt
gctaaacgtcgtggtggtaagaacgacattcgcagtggccgcaaacctaatggtggttat
ggtggcaaccgtggtacttccggtggcagcactggtggataccgtggaaaccgtgacaac
aacggtggcggaagtcgtggtggctacagcagcggtggcagtaactatggtagtggcagt
ggcggttatggcggtggctataaaggcaaccgtgatggcgcagctggccgtgatggtgga
gcgaaccgcagtgcggaccgcaaaccatctactcgcccaagcagcacaagcacgcgtcca
gcaaaacgcgaagatttcgataattaa
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