Paenibacillus sp. FSL H7-0737: H70737_18440
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Entry
H70737_18440 CDS
T03359
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H70737_18440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paej03019
]
H70737_18440
Messenger RNA biogenesis [BR:
paej03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H70737_18440
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
HOK_GEF
Innexin
DUF4083
Motif
Other DBs
NCBI-ProteinID:
AIQ24648
UniProt:
A0A089IQ58
LinkDB
All DBs
Position
complement(4110659..4112200)
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AA seq
513 aa
AA seq
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MQAWIWVIIVLVVAALFFGFGYFIRKSLAEAKIQSAEREAVVIVENAKKDAEALKKETVL
EAKDEVHRIRTEAEKETRERRNEIQRQERRLLQKEESLDKKMESLERKEEQVANKEKRID
ETQQQIDVIYKNQVTELERISNLSIEDARSIILSNVEQEVRHETAQMIKEIEQQAKEEAD
KKSREIITLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREVARTALEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQAT
FEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAGELGEDIVLAKRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIKRLEKLEEISESFEGVEKSFAIQAGREVRVMVQPEKIDDAEAFRL
ARDITKMIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcatggatctgggtcattatcgttctcgttgtagctgcattattctttgggttc
ggttattttattcgtaaatcccttgcagaagctaaaattcaaagcgcagaaagagaagcc
gtagtcatcgtggagaacgcgaagaaagacgcagaggcgctgaagaaagaaacagtattg
gaagctaaggacgaagtccatagaatccgtactgaagctgagaaagaaactcgtgaacgt
cggaatgaaatccaacggcaagagagacgtttgctgcaaaaggaagaatctctggataaa
aaaatggaatcgcttgaaagaaaagaagaacaagtagctaacaaagagaaacgaattgat
gaaacccaacagcaaattgatgttatttacaaaaaccaagtcactgaattggagagaatt
tccaatttaagcatcgaagatgcaagaagtattattcttagcaatgttgagcaagaagtt
cgccatgaaacggctcaaatgatcaaagagattgaacagcaggcgaaagaggaagcggat
aagaaatcccgtgaaatcatcacactcgctatccaacgctgtgcagctgatcacgtagcg
gagacaacagtttcagttgttaccctgccgaacgaagagatgaaagggcggattatcggt
cgtgaaggccgtaatattcgtgcactcgaaactcttacaggtatcgacctcattattgat
gatacgccggaagcagttattttgtcgggatttgatccaatccgccgtgaagtggcccgt
acggcacttgagaagcttgtggcagatggacgtatccatcccgctcgaattgaagagatg
gtggagaaatcccgcaaagaagtggacgaacgaattcgcgaatatggtgaacaagctact
ttcgaagtgggtgttcacggattgcatccagatttgatcaagattctgggtcgtctgaaa
ttccgtacaagctatggtcaaaatgtattgaagcactccatggaggttgcttatttaact
ggactgatggccggtgagcttggggaagacatcgtgcttgcaaaacgtgcaggattgctc
catgatatcggcaaagcgctggatcatgaagtagaaggatcgcatgttgagatcggcgtt
gaactagcgaagaaatataaggaacatccggttgttatcaacagtatcgcgtctcatcat
ggagattgcgaagctacctcggttattgctatgttggttggtgcagctgatgcattgtca
gcagcaagacctggcgctcgccgtgaaacactggaaacgtatattaaacgtctagaaaaa
ctggaagaaatctcagagtcattcgaaggcgttgagaaatcatttgctattcaggcgggc
cgtgaggtacgcgtgatggtacagccagagaagattgacgatgcagaggcattccgtctt
gctcgcgatattacgaaaatgattgaaagtgaactggattatccaggacatatcaaagtt
accgttattcgtgagacacgggctgttgaatacgctaaatag
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