Paenibacillus sp. FSL H7-0737: H70737_27600
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Entry
H70737_27600 CDS
T03359
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
paej
Paenibacillus sp. FSL H7-0737
Pathway
paej03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paej00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H70737_27600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paej03021
]
H70737_27600
03400 DNA repair and recombination proteins [BR:
paej03400
]
H70737_27600
Enzymes [BR:
paej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H70737_27600
Transcription machinery [BR:
paej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H70737_27600
DNA repair and recombination proteins [BR:
paej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H70737_27600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AIQ26260
UniProt:
A0A089ISP0
LinkDB
All DBs
Position
complement(6112909..6116520)
Genome browser
AA seq
1203 aa
AA seq
DB search
MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DIDIEKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNKPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKK
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGHAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGTFYLTMDNKEEKGSGMILRTVNEAVSAYQRGTAGLHARVAIP
VKALGKTCFTEKQQGAMLITTIGKIIFNEIYPSSFPYINEATKTNLLHGTPEKYFIYEKG
ADIRELIESAPEASAVGKEYLGLIIARCFETYHTTKTSMILDKIKQLGFTYSTRSGVTVA
VSDVIVPEEKVTILKESEAKVDVVANQYRRGLITNDERYDRVIEIWSKTKDDLTNILLKS
MDRFNSIMLMVDSKARGNKSQITQLGGMRGLMATPSGRIFELPIKANFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRIEGRYCFETVRHPETGEIIVHRNDLIDSDKAEAIVDAGVTKLQIRSVLSCRARHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVIKEIRETKDRREIEVQGEAESKTYSITYGSRLRVSEGQEIEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHIEVMIKQMLRKIRI
IDAGDTSLLPGAFADIHEYEAANKEAILSGKEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNVKLSDPNAESALESLEPV
PAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaattttgaatttatgaaaatcggactcgcttctccggagaagatt
cgttcatggtcccgcggagaagttaagaaaccggaaaccattaactatcgtacattgaaa
ccggaaaaagagggtcttttctgtgagcgtatctttggaccgcaaaaagactgggaatgt
cattgcggtaaatacaaacgtgtccgttataagggcgtagtctgcgaccgttgtggcgtt
gaagttactcgtgctaaagttcgtcgtgaacgtatgggtcacattgaattggctgctccg
gtatctcatatctggtacttcaaaggtatcccaagccgtatgggtttggcactagatatg
tctccaagatcacttgaagagattatctacttcgcttcgtatgttgtaactgacccaggt
gaaacaccactggaaaagaaacaacttctatccgagaaagaatatcgtagctaccgtgaa
aaatacggttacggattccaagcgggcatgggtgctgaagctgttaagaagcttcttcaa
gacatcgacatcgaaaaagagctggaattcctcaaagaagaactgcgtacggcccaaggc
caacgtcgtaaccgggcgatcaaacgtctggaagtcattgaagcattccgtaactcaggc
aacaaacctgattggatgatcatggatgttcttccggttatacctccggagcttcgtccg
atggttcaattggatggtggccgttttgctacgtctgatttgaacgatctttatcgtcgt
gttattaaccggaacaaccgtctgaaaagactgctggatcttggtgcgcctgacattatc
gtgcagaacgagaaacggatgctacaggaagctgtcgatgctctcatcgataacggccgt
agaggacgtccggtaacgggtcctggtaaccgtccattgaaatctctcagccacatgctg
aaaggtaaacaaggacgtttccgtcagaacttgctcggtaaacgggttgactactctggt
cgttccgttatcgttgtaggaccgtacctcaagatgtatcagtgcggacttcctaagaaa
atggcgctagaattgttcaagccttttgtcatgaaggaattggttaataagggcctagcc
cacaacataaagagcgcaaaacgtaaagttgagcgtgtaagtcctgaagtatgggatgta
cttgaagaagtaatcagagagcacccagtacttctaaaccgcgcaccaacacttcaccgt
ctcggtatccaagcttttgaaccgattttggtggaaggtcatgctattcgtcttcaccca
ctcgtatgtacggcttataacgccgactttgacggtgaccaaatggcggtgcacgttcct
ctgtcagcagaagctcaagcggaagcacgtattctcatgcttgcatccggtaatatcttg
aaccctaaagacggaaaaccggttgtaacaccttcccaggatatggtccttggtactttc
tacctgaccatggacaacaaggaagaaaaaggatcaggtatgattctgcgtaccgtaaat
gaagctgtatcagcttaccaacgcggaactgcaggtcttcatgctcgtgtagctattcca
gttaaagcactaggtaagacttgctttacggaaaaacaacaaggcgcaatgttgattact
acgatcggtaagattatctttaatgaaatttacccaagtagtttcccttatatcaatgaa
gcgactaagactaacttgctgcatggcacgccagagaaatactttatctatgaaaaaggc
gcagatattcgcgagctgattgaatccgctcctgaagccagcgctgtaggtaaagaatat
ctgggtctgattatcgcacgttgttttgaaacttatcatacgaccaaaacctctatgatt
ttggataaaattaaacaactcggctttacttactccacacgttccggtgttaccgttgct
gtgtcggatgttatcgtgcctgaggagaaagttacgatcctgaaagagtccgaagctaag
gtagatgtggttgctaaccaatatcgccgtggtctgatcactaatgacgaacggtacgac
cgcgttattgagatctggtcgaagacgaaggatgatcttacgaacatcctgcttaaatcc
atggaccgtttcaactcaatcatgctcatggttgactccaaagcgcggggtaacaaatcg
cagatcactcagctgggtggtatgcgtggtctgatggcaacaccttcgggtcggattttc
gaattgccaattaaagcgaacttccgtgaaggtcttacggtcttggagtactttatctcc
actcacggagcgcgtaaaggtcttgccgataccgcacttcgtactgctgactccggttac
ttgactcgtcgtctcgttgacgtagctcaggacgttatcgtccgtgaggaagattgtgga
acggataaaggatttacagttagtcgtattcaggatggcaaagaggttattgaggatctg
tatgaccgtattgaaggtcgttactgcttcgagactgttcgtcatccggaaacaggcgaa
atcattgttcaccgcaacgatttgattgactccgataaagcggaagcaatcgtagacgct
ggtgtaactaagctacaaatccgatctgtactaagctgccgtgctcgtcatggtgtttgt
aagaaatgttacggtcgtaacttggcaactggtaaacacgttgagatcggtgaagcggtt
ggtattatcgctgcacaatctatcggtgaaccaggaacccagcttacaatgcgtacgttc
cataccggcggtgttgccggtgatgacatcacgcaaggtttgccgcgtattcaagagttg
tttgaagcccgtaaccctaaaggtcaggctacaatcagtgagatcgatggtgtaatcaag
gaaatccgtgaaactaaggatcgtcgtgaaatcgaagttcaaggtgaagcagaatccaag
acttattccattacttatggatcacgtctacgtgtcagcgaaggccaagaaattgaagcc
ggcgatgagttgacagacggttcgattgaccctaaagaaatgctgcgaatcaaagggatc
cgtggggtacaaaactacattctgcaagaagttcagcgtgtatatcgtaaccagggcgtt
gagatcaatgataagcacattgaagttatgatcaaacaaatgcttcggaagatccgtatc
attgatgcaggtgacacaagtctgttaccaggcgcgtttgcggatattcatgaatatgaa
gctgctaataaggaagccatcttgtcaggtaaagagcctgcagttgctaaaccggtctta
ctcggtattaccaaggcatctcttgagacagattccttcttatccgctgcatctttccaa
gaaactactcgtgtcttaacagacgctgctatcaaaggtaaagtagataagttgcttgga
ctcaaagaaaatgttattatcggtaagttgattcctgcaggtactggtatgaatcgttac
cgtaatgttaagctaagtgatccaaatgcagaaagcgcgcttgaatctttagagccggtt
cctgctgaataa
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