Paenisporosarcina cavernae: D3873_01220
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Entry
D3873_01220 CDS
T05647
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13530
AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase [EC:2.1.1.-]
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paek03000
]
D3873_01220
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_01220
Transcription factors [BR:
paek03000
]
Prokaryotic type
Helix-turn-helix
AraC family
D3873_01220
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
D3873_01220
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HTH_AraC
HTH_23
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AYC28556
UniProt:
A0A385YPN0
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All DBs
Position
complement(221656..222333)
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AA seq
225 aa
AA seq
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MTEISLSCFFIAQIRNSYNQFSILLTKGVWRMEIRRPTDSEWDAIVQNDAKHDASFFYGV
SSTHIFCKVSCKSRTPKRENVHISNDSSDFVRAGYSPCKRCKPDNLLLPEKEWVHVIEEY
IAHHFQLPLTLQTIADACHGSPSHVHRTVKKHTGLAPLALVQQHRIEYAKHLLSTTEWPI
SRVATKVGYGTTAYFITTFKKFTSCTPLQFRKEQRSHGNDLLDKR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaatttcgttatcttgcttttttattgcccaaatccgcaattcctacaaccaa
tttagtatacttctaacaaaaggagtgtggaggatggaaattcgtagaccgacagatagt
gaatgggatgcgattgtacaaaatgatgctaaacacgacgcttccttcttttatggcgta
tcctcgacacacatattttgcaaggtctcgtgcaaatccagaacgccgaagcgagaaaat
gtgcatatttcgaacgattcctccgatttcgttcgtgccggatatagtccttgcaagcgg
tgcaaaccggacaatcttttattgccagagaaagaatgggtacacgtcatcgaggaatac
atcgcgcatcatttccaactacccttgacacttcaaacaatcgcagacgcctgtcacggc
agcccctcccatgttcatcgaacggttaaaaaacacactgggctcgctccactggcactc
gtccaacaacacagaatcgagtatgcaaaacacttgctgagcacgacagaatggccaata
tcccgcgtcgcaacaaaagtcggatatggcaccactgcttatttcattaccacattcaaa
aaattcacttcctgcacaccgctgcaatttcgaaaggagcaacgatctcatggaaacgat
cttttggacaagcgctaa
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