Paenisporosarcina cavernae: D3873_02560
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Entry
D3873_02560 CDS
T05647
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D3873_02560 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paek03021
]
D3873_02560 (rpoE)
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_02560 (rpoE)
Transcription machinery [BR:
paek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D3873_02560 (rpoE)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D3873_02560 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Mnd1
ColG_sub
WEF-hand
Smg4_UPF3
BUD22
Motif
Other DBs
NCBI-ProteinID:
AYC28805
UniProt:
A0A385YPZ4
LinkDB
All DBs
Position
485136..485684
Genome browser
AA seq
182 aa
AA seq
DB search
MDIRGMSIEQLREESFIDVAFAILENGKQTLTLQELSKEIQKVNEMTDQEIKDRMLQFYT
DMNVDGRFLAIEGNRWGLREWYPVDQIEEETAPTVKVRKKKAKVVADDDLEDDSDDDEIG
FDEDFDEFVEDLDDDEEEDFDLDPADEEEDETEEIEVVDADELLEADDELEIVEDDEEED
EE
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttggatattcgtggaatgagtattgaacaattaagagaagaatcatttatcgatgtcgcg
tttgcgattttagaaaatggtaaacaaacattaacgttgcaagaattgagcaaagaaatt
caaaaagtgaatgaaatgacggatcaagagattaaagaccgcatgcttcaattttataca
gatatgaacgtcgatggtcgtttccttgcaatcgaaggaaatcgttggggcttacgtgag
tggtacccagtagaccaaatcgaagaagaaacagctccaactgtaaaagttcgcaagaaa
aaagcgaaagtcgttgctgatgatgacttggaagacgattcagatgacgacgaaattggt
ttcgacgaagactttgatgagtttgtggaagatctagatgacgacgaagaagaagacttc
gatttagatcctgcggatgaagaagaagacgaaacagaagaaatcgaagtggtcgatgca
gatgaactgctcgaagcggacgatgagttagaaattgtcgaagatgacgaggaagaagac
gaagaataa
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