Paenisporosarcina cavernae: D3873_03570
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Entry
D3873_03570 CDS
T05647
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_03570 (addB)
Enzymes [BR:
paek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3873_03570 (addB)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D3873_03570 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
DUF6670
Motif
Other DBs
NCBI-ProteinID:
AYC28994
UniProt:
A0A385YR78
LinkDB
All DBs
Position
705311..708805
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AA seq
1164 aa
AA seq
DB search
MTLRLVTGRAGAGKSSFIRQEIAERCQVDPLGKAIFLIVPDQMTFTAEKSLSTSRGMHGI
VRAQVSTFKRLAWRILQEVGGISKQEVSGYGYRMLLRKILEENRESLSLFRLAATKRGFT
EQLEELLREMQRYCVETDVFLAMKDDVEKLDAPESLKQKLRDVALIMTEVEDRLGTTHVD
SQGYVRLLQQSMHLSDELRDAEVYVDGFVSMTTRERELLGELMKCAKRVTIALPMEDVQA
DMSDEQSIFHTAAVTAEKLRALARENGIAIEETISLQGTTRFHSEDILHLERELHRYPAE
ERQATGDVSIIEAENRRAEVHAIARKIRGLVRDEGYRYRDIAILTRQTEIYDVLLRNTLP
EYDIPLFVNEKRPMLHHPLLEWARSVMEVVTSNYAYEPVMRALKTDLFIPKGANRTVWRE
RIDVLENFLLAHGIYGDRWGDDKRWFVKRYRGLEFHTSLQTDEERAMQADIEEVKATFYP
YIEALKEKLTEGATGKDVATALFEMASDLQLYEKLIDRKDEDEANHLLIEAGDHEQAWNA
WITVLDQFVLLFGEEKKPLEEFVALLEEGFDQLEFSRIPPSVDQVSVGTVDLSRLSNVKA
AFVIGVNDGVFPKRVEQDGLLSDADREWLSQLGVELAPTSKMRLMDEQYVMYRAVSTASH
RLYFSYPLADEEGKALLPSTYIKRMQQLLHGLPFETAVIQPAELSTNALNYFEHARTSIA
YIASRMREETWQEDSNGEWAALASYLEADPLWRDTLAFVTKPLREDRQAEKLPEETTTAL
YGETISSSVSRVEKYFNCAFAHFAAYGLRLSEREEYRLEAPAIGDLFHEALKWIGNETKR
LNRSWASLSTEEAWELARQAVDAISPYFVHQILLSTKRHLYIQRKLVQILQRTMRTLKEH
AKVSNFQPVAIEAGFGFGEQLPPLELQLQHGKKIRLRGRIDRIDAHKIGDKTYLRIVDYK
SSAKKLDIADVYYGLSLQMLTYLDVATSHAKELLSVEADPAGVLYVHVHNPMLAVTQEAK
EDVVEEDVLKKFKMRGLLIDNVDVLREMDTELAGHSTIIPAYVKTDDTLSYHSSSVVSTE
DMEHLRTFTRKKHQQAGEEMLAGNTAVLPARIKNKTACDYCQFRSVCQFDPTDPHQHYRS
LAPLKDEDATAKIRKEVRTRDDSN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcagattggtcacaggtcgtgcaggagcagggaaatcgagtttcattcgccaa
gaaatcgcggagcgctgtcaggtagatccgttagggaaggcgattttcctgattgtgccg
gatcagatgacgtttacggcggagaagagtttgtcgactagccgcgggatgcacgggatt
gtgcgcgcgcaagtgtcgacgtttaagcgtttagcttggcgcattttgcaggaagttggc
ggcattagtaagcaggaagtgtcggggtatggctaccgaatgttgcttcgaaagatttta
gaggagaatcgcgagtcgttgtcgttgttccgtttagcagcgacgaaacggggttttaca
gaacagttggaggaattgctacgcgagatgcagcggtactgcgtggagaccgatgtgttt
ttggcaatgaaagacgatgtggagaagttggatgctccggagtcgctcaagcaaaagctt
cgagatgttgcgctcattatgacggaagtggaagatcgtcttgggacaacgcatgttgat
agtcaagggtatgtgcggttgttgcaacagtcgatgcatttgtcggatgagctacgtgat
gcggaggtgtatgtcgacgggtttgtgtcgatgacgacgcgtgaacgcgagctactaggt
gagttgatgaagtgtgcgaagcgtgtgacgatcgcgcttccaatggaagatgtgcaggca
gatatgtctgatgagcagtcgatttttcatactgctgctgtgacggcagagaaattacgt
gcactcgctagggaaaatggaattgcgatcgaagaaaccatttcgttgcaaggaaccact
cgctttcattcagaggatattctacatttagaacgtgaacttcatcggtatcctgcagaa
gaaagacaagcaaccggtgatgtgtcgattatcgaagcggaaaatcgtcgggcagaagtg
catgcgattgcgaggaaaattcggggtcttgtgcgagacgaagggtatcggtaccgagat
attgcgattttgacgagacagacagagatttacgatgttctccttcgaaatacgcttccg
gagtatgatattccgctttttgtgaatgaaaagcggccgatgttgcatcatccactactt
gaatgggcgagatcggtgatggaagtggtgacatcgaattatgcgtatgagccagtgatg
cgcgcattgaaaacggatttatttattccaaagggtgcgaatcgtacggtttggcgagag
cgaatcgatgtactggaaaactttttactagcgcacggtatttatggggaccggtgggga
gacgacaagcgctggtttgtgaagcggtatcgtggactggagtttcatacgtcacttcaa
accgatgaagagcgagcaatgcaagcagatatagaagaagtaaaagcaacgttttatcct
tatatagaggcgttgaaggaaaaattaacagagggtgcgacgggtaaagacgtggcaact
gctttgtttgaaatggcaagcgacttacagctgtatgaaaaattaatcgatcgaaaagac
gaagatgaagccaatcatttgttaatcgaagcaggagatcacgaacaagcatggaatgcc
tggatcacggtactcgatcagtttgtgttgttatttggcgaggagaaaaagccgctagag
gaattcgtcgcgctattagaagaagggtttgatcaactcgaattttcccgtattccacca
tctgtagaccaagtgtcggtcgggacggttgatttgtcgcgcctttcgaatgtaaaggca
gcgtttgttattggtgttaacgacggagtctttccaaaacgtgtggaacaagatgggtta
ctgtcggatgcagacagggagtggttatcgcaattaggtgtggaacttgcacctacttct
aaaatgcggttaatggacgaacagtacgtgatgtaccgagcggtatctactgcatctcac
cgattgtatttctcgtatccgttagcggatgaagaaggaaaggcgttgttaccttcgaca
tatattaagcgaatgcaacagctgttacatggactcccgttcgaaacggcggttattcaa
cctgctgaattatctacgaatgcgttgaattattttgaacatgcgagaacttctattgcc
tatatcgcaagtagaatgcgagaagaaacgtggcaagaggactcaaacggagaatgggca
gcacttgcttcttatttagaagcggatccgttatggcgggatacgttagcgtttgtgacg
aaaccgctacgggaggatcgacaagcagaaaagttgcccgaagaaacgacgaccgcactt
tacggggaaacgatttcatcgagtgtgtctcgtgtggaaaagtatttcaattgtgcgttt
gcccattttgcggcgtacggtctgcgtttaagcgaacgcgaagagtaccgattagaagca
cctgcaatcggtgatttattccacgaagcattaaaatggattggcaatgaaacgaagcgg
ctcaatcgttcatgggcgtcgctttcaactgaagaagcttgggaattagcgaggcaagca
gttgacgcgatttctccttattttgtgcatcaaattttactgagcacgaaacgtcatttg
tatatccaacggaagcttgtgcaaattttgcagcgaacaatgcggacattaaaagaacat
gcgaaagtatcgaattttcaaccggtggcaattgaagctgggtttggatttggcgagcag
ttgcctccacttgaattacagttgcaacacggtaaaaaaattcgacttcgtggtcgtatt
gaccgaattgatgcgcacaaaataggcgataaaacgtatttacgcattgtcgattacaaa
tcgagtgcaaagaaattagatatagcagatgtgtactacggactaagcctacaaatgctg
acgtatttagacgtcgcaacaagtcatgctaaagagttattgtccgttgaagcagatcct
gcaggcgtgttgtatgtccacgtgcataacccgatgcttgcggtgacgcaagaagccaaa
gaagacgtggtggaagaggacgtattgaagaagtttaaaatgcgtggtttgttaatcgat
aatgtggacgtgttacgcgaaatggatacggaacttgcaggtcattcgacgattattccg
gcatatgtgaaaacggatgatacattgtcgtaccattcttcgagtgttgtttcgacggaa
gatatggagcatttacggacgtttacgcggaaaaaacaccaacaagccggtgaagaaatg
cttgctggtaatactgcggtgttgccagctcgcataaaaaacaaaacagcgtgcgattac
tgtcagttccggagtgtatgtcagtttgacccgacagatccgcatcaacattatcgttcg
ttagctccattaaaggacgaggatgcgacagcgaaaattcgaaaggaggtccgaacacgt
gatgattccaactaa
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integrated database retrieval system
