Paenisporosarcina cavernae: D3873_03880
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Entry
D3873_03880 CDS
T05647
Symbol
sigI
Name
(GenBank) RNA polymerase sigma-I factor
KO
K03093
RNA polymerase sigma-I factor
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paek03021
]
D3873_03880 (sigI)
Transcription machinery [BR:
paek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D3873_03880 (sigI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
FTZ
Xre-like-HTH
SWIRM-assoc_1
Motif
Other DBs
NCBI-ProteinID:
AYC29055
UniProt:
A0A385YQM5
LinkDB
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Position
773960..774715
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AA seq
251 aa
AA seq
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MLLATIHNLFRNTAKQMNVEEQVMLAKQGEEAVLHELLLSHTAFMKKTASYVCKRYIREA
DDEYSIAMSAFHDAIISYETDKNASFLTFAHLLIRRKLIDHIRKEARRIDQPVGNSLLID
EEANDAFTHLESSHAFEQFTAEQQQQERLRQIIQFEEMLQPYQLSFSQLAEVAPSHEDAR
RTAFQIAQIVAETDEFFDTLQTKKRLPLKELEELVSVSRKTLERQRKYIIAIALLLNSEL
HYLIDYLKGRM
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgttacttgcaacgatccacaatttgtttcgaaatacagctaagcagatgaatgttgaa
gagcaagtaatgcttgcgaagcagggcgaagaagcagttctacatgaattgcttctttcg
cacactgcttttatgaaaaaaacagcttcatatgtatgtaaacgatacattagggaagct
gatgatgaatatagcattgccatgtccgctttccatgatgccattataagttatgaaacg
gataaaaatgctagttttttaacatttgcccatttgctgattcggcgtaaactgatcgac
catattcgtaaagaagctagaagaatcgatcaaccagttggaaacagcttgctcattgac
gaagaagcgaatgatgcttttactcatttagaatcatcacatgctttcgagcagtttaca
gcggagcagcaacagcaagaaagattacgtcaaattatccaatttgaagaaatgttgcag
ccttaccaactatctttttcccagttagcggaagttgctccttctcacgaagatgcaaga
agaactgcttttcaaattgcccagattgtagcagaaaccgatgagttttttgatacttta
caaacgaagaagagattgccactaaaagaactagaagaactcgtttcggtatctcgcaaa
acactcgaacggcaacgtaaatatatcattgcgatcgcactactattaaacagtgagctt
cattatttaatagattacttaaaaggacggatgtaa
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