Paenisporosarcina cavernae: D3873_04415
Help
Entry
D3873_04415 CDS
T05647
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
paek
Paenisporosarcina cavernae
Pathway
paek00550
Peptidoglycan biosynthesis
paek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
D3873_04415
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
paek01011
]
D3873_04415
Peptidoglycan biosynthesis and degradation proteins [BR:
paek01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
D3873_04415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AYC29159
UniProt:
A0A385YR18
LinkDB
All DBs
Position
883100..885004
Genome browser
AA seq
634 aa
AA seq
DB search
MPIIARKRLRFIVVLFLLLFMSVTIRQGYVQITKHQELKEKALENWDRTLPFKEARGKIV
DRNGRLIVGNTLAPSLYFMPAQNSDIENVAEKLSPILQVDKKKLHDQLSKRTFLITIAPE
GKHLTLQQVKEVHQLQLPGVYAGVDMIRYYPYEQMLARLLGFTGYDGEGLAGLEYQYNDY
LSSTSSSLRLVTDAKGQSLPHENDRWKTGTEGANLQLTIDLAIQKVVERELSQAMEYYDA
EQALALVADPNNGEILALSSFPSFDPLSYQSVSPSIYNQNLPATMTFEPGSTFKIITLAA
ALEEKKVNLQKEHFYDPGYAIVEGARLKCWKREGHKDQTFLEVVENSCNPGFIELGRRVG
PTKLQQYIRAFGFGEKTNAGIAGESKGILFSGDRYGPVEHATTSFGQGISVTALQQVQAV
SAAINGGKLYRPSIVKQVLDNNSGDNLLQKKSPFIRQVISEETSKEVREALESVVAVGSG
RNAFRENLRIGGKTGTAQKVINGKYAEDAFIVSFMGFAPITKPQVVVYVAIDHPKVGMQF
GGVVAAPIVGRIMEDIAPILPIDPQKGQLEKEYRWGDELVKEVPSLEGQLKESVLELQEP
FKIEWHGTGSTIISQLPKAGVKLPLGGTIHLYLQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattgcgagaaaacgattacgatttattgtcgtactttttcttttgttattt
atgtctgtaacgatccgtcaaggctatgtccagataacgaaacatcaggaattaaaagaa
aaagcgttagaaaactgggacagaacactaccgtttaaagaagcgagaggcaaaattgtt
gatcggaatgggagactaatcgtcggaaatacattagccccttctctttattttatgcct
gctcaaaacagtgatattgaaaatgtagcggagaagctgtcgcctattttacaagtagac
aaaaagaaattacacgatcaattatcgaaaagaacatttcttatcacgatcgcaccagag
ggaaagcatttaacacttcaacaagtaaaagaagtgcatcaacttcaattgcccggtgtt
tacgcaggtgtggatatgattcgttattatccatacgaacaaatgctagcacgtctactc
ggatttacagggtatgatggagaaggtttagcgggattagaatatcaatacaatgactat
ctctcttccacttcaagtagtcttcgtttagtgacggatgcaaaaggtcagtcactgcca
cacgaaaatgatcgttggaaaacaggaacagaaggcgctaacttacagcttaccatcgat
ttagcgatacaaaaggtagtagaacgagaactgtctcaggcgatggaatattatgatgcc
gagcaagcattagcactcgttgcggatccaaacaacggagagatattagccttatcatct
tttccaagttttgatccactttcctatcaaagtgtctctccctccatttataatcaaaat
ttgcctgcgacgatgacatttgaaccgggctctacctttaaaatcattacgcttgccgca
gcgttagaagaaaaaaaggtaaatttgcaaaaagaacatttctatgaccctggttacgca
atagttgaaggcgctcgattaaagtgttggaaaagagaaggccataaagatcagacattc
ttggaagtagtcgagaattcttgtaaccctggctttatcgaattaggtcgtcgagtggga
ccaactaaattacaacaatacattcgcgctttcgggtttggagaaaaaacaaatgctgga
attgctggtgaatcgaaaggaatacttttttcaggagaccggtatggtccagtggagcat
gctactacttcttttggccaaggaatctctgtcacagcacttcaacaagtgcaagctgtt
tcagcggcgattaatgggggtaaactgtatcgtccttcgatcgtaaaacaagttctcgac
aacaatagtggcgataacttgttacaaaaaaaatcaccttttattcgccaagtcatctcg
gaggaaacgtcaaaggaggtaagagaagcgttagaaagcgtggtggccgttggctcaggt
agaaatgcctttcgtgagaatttacgtattggtggtaaaactggaacggctcaaaaagtc
attaacggaaaatatgcagaggatgcatttatcgtatcgttcatgggctttgcaccaatt
acaaaaccgcaagtggtggtgtacgttgccattgaccatccaaaggttggcatgcagttt
ggaggcgttgtagctgcaccaattgttggaagaatcatggaagacatcgcgccgattctt
ccaattgatcctcagaaaggacaattggagaaagaatacagatggggcgacgaattggtg
aaagaagtgccttcattagaaggtcaattgaaagaatcggtcttagaattacaggaacca
tttaaaattgaatggcatggtactggatccaccattatttctcaattaccaaaagcagga
gtaaaacttcccctcggaggtacgattcacttatacttacaataa
DBGET
integrated database retrieval system
