Paenisporosarcina cavernae: D3873_04600
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Entry
D3873_04600 CDS
T05647
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D3873_04600 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_04600 (priA)
Enzymes [BR:
paek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3873_04600 (priA)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D3873_04600 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
ResIII
DEAD
PriA_C
Helicase_C
Zn_ribbon_PriA
PIF1
AAA_19
Cas3-like_C_2
AAA_30
zf-Sec23_Sec24
Motif
Other DBs
NCBI-ProteinID:
AYC29193
UniProt:
A0A385YUP2
LinkDB
All DBs
Position
920727..923141
Genome browser
AA seq
804 aa
AA seq
DB search
MIAEVIVDIATSAIDRKFDYLVPERYTSVVQVGSRVKVPFGPREIMGFIVGLKEETDVDI
QKQKELMDVVDLHPLLTTEMMELAKWVKQDTLCLEIDVLQMMLPAALRSTYEKVVVLEKP
DLIKDEELIALFGSKNFFVLPKDIDSTTVKKLKRLADEGILSFETVMKQKTAVKKIAYLE
LSQDTTIFQQVKEALTANAKKQLALLDKLASENRTSIAMKEITNEWGFTKAVVDQLVQKG
IGTITEKEVYREPVDFQSVEKKSPLQMTEEQQIAYEKVLHSFEQHRAETFLLHGITGSGK
TEIYLQMIAHALSVGKQAIMLVPEIALTPQMTERFVERFGSQVAVLHSGLSAGEKYDQWR
KIHRSEVKVVVGARSAIFAPFENVGVIIMDEEHESTYKQEDSPRYHARDIAIWRSEYHNC
PVILGSATPSLESFARAQKGVYTLLTLVNRPKSQPLPPVQIVDMREEMKKGNRSVFSIDL
VEAMRNRFSRNEQVVLLLNKRGYSSFVLCRDCGTVMNCPSCDISLTYHRANERMKCHYCA
YENPVPTSCPSCQSDHIRFFGSGTQKIEEEIAKLFPAEKMLRMDVDTTRKKGAHASILQA
FGNQEASILLGTQMIAKGLDFPNVTLVGVLSADTALFVPDFRAAEKTFQLLAQVSGRAGR
HDKEGNVILQTYSPEHYAIQFSKAHDYQGFYRQEMFYRHEGKYPPYTFIGSIIFSHEDLL
SVSDYAMKSVQWLRENLPDSVEVIGPSIASISRLQNRYRYQCLLKYRKDEDVGHLLHQLQ
NVYKTHYMKNGYHLSITKNPSVLM
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaagtcatagttgacatcgctacttctgcgatcgatcgaaaatttgattac
cttgttccagaacggtatacgtccgtcgtgcaagtcgggtcaagagtgaaagtaccattt
ggaccgagagaaattatggggttcattgttggtttaaaggaagaaaccgatgttgatatc
caaaaacaaaaagagttaatggatgttgtagatttacacccgttacttaccacggaaatg
atggagcttgcgaaatgggtaaaacaagacacactttgtttggaaattgatgttctgcag
atgatgcttccagctgcactccgttcgacgtatgaaaaagtggtagttttggaaaagcca
gatttaatcaaggatgaagaattgattgcgcttttcggatcaaagaatttttttgttcta
cctaaagatatcgattctacaactgtgaaaaagttaaaacgtttagcagacgaaggcatc
ctttcatttgaaaccgtgatgaaacaaaaaacagcagtgaaaaaaatcgcgtacttagag
ctgtcgcaggataccacgatttttcaacaagtgaaagaagctttaacagcaaacgcgaaa
aaacaacttgcattgttagataaattagcttcagaaaatcgcacgtcgattgcgatgaaa
gaaataacgaatgaatggggatttacgaaagcggtagtagaccaattagtgcaaaaagga
atcggcactattaccgaaaaagaagtgtaccgggagccagtggatttccaatccgttgaa
aagaaatctcctcttcaaatgaccgaggaacaacagattgcctatgaaaaagtgctgcat
tcgtttgagcagcatagagcagaaacgtttctattacacggaattactggtagtggaaaa
acggaaatataccttcaaatgattgcacacgctttgtcagtaggaaagcaagcgattatg
ttagtacccgaaattgccttaacacctcaaatgacagagcgttttgttgaacgatttggc
tctcaagttgccgtcttgcatagcggactttctgctggggaaaaatacgatcagtggcgg
aaaattcatcggtcggaagtgaaagtggtcgtaggtgctagatctgcaattttcgcaccc
tttgagaatgtcggcgtcataattatggatgaagaacatgaatctacctataagcaagaa
gattctccaagataccatgcaagagatatcgctatatggcgtagtgaataccataactgt
ccagtaatactaggtagtgctactccttcgttggagtcatttgccagggctcaaaaaggc
gtttacacattattaacgttagtgaatcggcctaaatcgcaacctttacccccagttcaa
atcgtcgatatgcgagaggaaatgaaaaaaggtaatcgctccgtgttttctatcgactta
gtcgaagcgatgagaaacaggttttctcgaaatgagcaagtagtgctgttattaaataag
cgtggatactcttcgtttgtattatgtcgggattgtggtactgttatgaattgtccttcg
tgtgatatttcactcacataccacagggcgaatgaacggatgaaatgccactattgtgca
tatgaaaatccagtacctacatcgtgtccaagttgtcagagtgatcatattcgtttcttt
ggaagtggtacgcaaaaaatcgaagaagaaatagcgaaactatttccagcggaaaaaatg
ctgcgaatggatgtcgacacgacaagaaaaaaaggggcacatgcctccattttgcaggca
ttcggaaatcaagaagcttctatattattaggaacacaaatgatcgcaaaaggactcgat
tttcctaatgtcacgttagtcggtgtcctttcagcggacacagcattatttgttcctgat
ttccgggcagcggagaaaacgtttcaattattagcgcaagtgagtggtcgggcaggaaga
catgataaggaaggaaacgttattttacaaacgtattctccagaacattatgcaatccag
ttctctaaagctcatgattatcaaggtttttacagacaagaaatgttttatcggcacgaa
ggaaaatacccaccgtatacgtttatcggttcgattattttctcacatgaagatttactt
tctgtaagtgactacgcgatgaaatccgttcaatggttaagagaaaatcttcctgattct
gtggaggtaattggtccttcgattgcctcgatcagtcggttgcaaaatagatatcggtat
caatgtttgttaaaatacagaaaagatgaggatgttggtcaccttttacaccaactccaa
aacgtgtacaaaacacactacatgaaaaatggataccatttgtccattacaaaaaaccct
tcagtgctaatgtaa
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