Paenisporosarcina cavernae: D3873_04705
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Entry
D3873_04705 CDS
T05647
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paek03036
]
D3873_04705 (smc)
Chromosome and associated proteins [BR:
paek03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
D3873_04705 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
ABC_tran
RDM
Motif
Other DBs
NCBI-ProteinID:
AYC29214
UniProt:
A0A385YRU0
LinkDB
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Position
942509..946093
Genome browser
AA seq
1194 aa
AA seq
DB search
MFLKRLEVIGFKSFADRIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGAK
MEDVIFAGSDSRKPLNFAEVTLVLDNSDQRIPLDFHEISVTRRVFRSGDSEYQINKQSCR
LKDITDLFMDSGLGKEAFSIISQGRVDEILNSKAEDRRSIFEEAAGVLKYKLRKKKAESK
LFETDDNLNRVLDILHELEGRMEPLREQASKAKDYVEMTTSLKDIELNVLAYDWKAMEEK
SQELATTMSQLTKEKENLQQSIASLEESLTKQRLELGQQDTRLDEAQEVLVEASSELERW
EGRKLLFQEKNTNAATQIAKLEEEKRALEKEMDSIQSEISSLGQRKTEKETQLKEAKISS
KQLEHQMVKSSAEIEEELEEWKSKYIDRLNEEATLKNEVKNILQLLSSEEAHQSKVSGES
SQVQHDLSELHQNRQQVERSLKSIREELSGKRGAYSKSSTELEEWKQTLESKQSILYKAY
QHAQQLKARKESLENLEAEFSGFFQGVKEVLQAREKGQLNGIIGAVAELISVDAAYSKAI
ETSLGGALQHVVTKTDQDARQAIQLLKQKRMGRATFLPLSVMKARKLSGDVISSIKGHPA
FVDTADRLVESQAENRVIIENLLGNVIVAKDLEGASKLAKVLQHRYRIVSLDGDIVNAGG
SLTGGASKQQSSVFTRKAELEQLISQVQELEHQLEQAEKQVASWKEKVSQRSVKLDEEKQ
QGEELRSKEMELELSLRQIDEQVKRLQDRFTITESEKEHMVDRQKSLEVRQIEAQNRLEK
VAIELTQMNEQIDRLTKLKNQGQQERDRLTELSAEMRSQIAVLSEQVLTMEKTYTSERNR
LQSVQDKVIQVDKEIRWIATGEGNSGPSEEEIEKALLTWMEKKQQSSEIVLASKEARQRI
QGMIIEIEQALKVENGKLQYQLDTIRKLDVQINRLDVEQQALIEHLDETYHMDETELQLP
DSESYDLADARKKLKLLKQSIEELGSVNVGAIEEFEKVSERFAFLTEQRQDLVDAKETLH
EAIKEMDQEMTSRFHDAFFAIRAQFTKVFRELFGGGNADLILTNPEDLLGTGIEIVAQPP
GKKLQALSLLSGGERALTAIALLFAILNIRPVPFCILDEVEAALDESNVVRYSQYLKKFS
QDTQFIVITHRKGTMEGADVLYGITMQESGISKLVSVKLEEEERELVTQGSAKN
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttaaaacgtttagaagtaatcggttttaaatcctttgcagatcgaattggtatt
gatttcgttcctggagtaaccgcggttgttggtccgaatggcagtggaaagagtaatgtc
acggatgcgatacgatgggtacttggagagcaatccgccaagtctcttcgaggtgccaaa
atggaagacgttatttttgctgggagtgattcaagaaaacctttgaacttcgcagaggta
accttagtattagataattccgatcaacgaattccattggattttcatgaaattagtgta
acgcgacgagtatttcgttctggggatagtgaataccaaattaataaacagtcctgcaga
ttaaaagatattacagacctttttatggattctggcttgggtaaagaagcgttttccatt
atctcacaaggtcgcgtggatgaaatattaaatagtaaagcagaagatcgacgttctatc
tttgaggaagctgctggcgtgctgaaatacaagcttcgtaagaaaaaagcagaatcaaaa
ttatttgaaacggatgataatttaaatcgtgtgttggatatcttgcatgagctcgaaggt
cgaatggagccattaagggagcaggcatcaaaggcaaaagactatgtggaaatgacaacg
tcgttaaaggatatcgaactaaacgttcttgcctatgactggaaagcgatggaagaaaag
agtcaagagctagcaaccactatgtctcagttgacgaaagaaaaagaaaatttgcaacaa
tcgattgcatcattagaagaatcattaacgaaacagcgtctcgagcttggtcaacaagat
acacgtcttgacgaagcacaagaagtattagtggaagcaagtagtgagttagagcggtgg
gaaggacggaagcttttattccaagaaaaaaataccaacgcagcaactcaaattgccaaa
ctagaagaagaaaaacgggctttggaaaaagaaatggacagtatccagtcggaaatttcc
tcacttggtcaacggaaaaccgaaaaagaaacgcaattaaaagaagcgaaaatttcatct
aaacaactggaacaccaaatggttaaatcatcagcagaaattgaagaagagctagaagaa
tggaaatcgaaatacattgaccgtttaaatgaagaagcaacgttgaaaaatgaagtaaag
aacattttacagttgttgagttcagaagaagcgcatcaatctaaagtatctggtgaatca
tctcaagtacaacatgatttaagtgaattgcaccaaaatcgtcagcaagtagagcgttca
ctcaagagcattcgtgaggagttatccggtaaacgtggcgcttactccaaatcttccaca
gagttagaggaatggaaacaaacacttgaaagtaaacaatcaattctatataaggcgtat
cagcatgcgcaacaattaaaagcgagaaaagaatcattagaaaacctagaagcggaattc
tctgggttctttcaaggtgtaaaggaagttttacaagctcgcgaaaaaggacagttaaat
ggaattattggtgctgtagcagaattaatatcggtggatgctgcctattcaaaggcgatt
gaaacctctcttggcggtgccttgcaacatgtcgtgacaaaaacagatcaagatgcgaga
caagcaatccaattgttaaaacaaaagcgaatgggaagagcaacctttctgccactatcc
gtcatgaaagcccgaaagctttctggagatgtgatttcctctatcaaaggtcatcccgct
ttcgttgatacagcagatcgattagtggaaagtcaagcagaaaatcgcgtcattatcgaa
aatctgttagggaatgtcatcgttgcaaaagacttagaaggtgcttcgaagctagcaaaa
gtacttcaacaccgctatcgaatcgtttctttagacggcgatattgtaaatgctggtggt
tccttaacgggtggagcgtcgaaacaacaatcctccgtatttacacggaaagcagaatta
gagcaactcatttcgcaagttcaagagttagaacatcaactagaacaggcggaaaaacaa
gtagcatcttggaaagaaaaagtttcgcaacgttccgtgaaacttgacgaagaaaagcag
caaggtgaagaacttcgttcaaaagaaatggaattagagttatctttacgacaaatcgac
gaacaggtcaaacgattacaggatcgcttcacgatcacggaatcagaaaaagagcatatg
gtcgatcggcaaaaatcattagaagttcgtcaaatagaagcacaaaaccgattagaaaaa
gtagccatcgaattgactcaaatgaatgaacaaatagaccggttaacaaaactgaaaaac
caaggacaacaagaacgtgaccgattgacagaactatccgcagaaatgcgttcacaaatc
gcggtcttgtctgaacaagtactaacgatggaaaaaacgtatacatccgaaagaaatcgg
ttacagtcagtccaagataaagtcatccaagtagacaaagagattcgttggattgctaca
ggggaaggtaattcaggaccttctgaagaagagattgaaaaagctctgctcacttggatg
gagaaaaagcagcagtcaagtgagattgttttagcgagtaaagaagctaggcaacgcatc
caagggatgattattgaaatagaacaagcgttaaaagtggaaaatggcaaactacaatat
caacttgatacaattcgaaaactagatgtgcaaatcaaccgtctggatgttgaacagcaa
gcgctaatcgagcatctagatgagacgtatcatatggatgaaacagaattgcaattacct
gacagtgagtcctatgatttagcggatgctagaaagaagctaaagctattgaagcaatcg
atcgaagaattgggttctgtgaacgttggtgcaatagaagaattcgagaaagtgtcagaa
cgattcgctttcttaaccgaacaacgtcaagatttagtagacgctaaagagacgttgcat
gaagcgatcaaagagatggatcaagagatgacttctcgttttcatgatgccttctttgcg
attcgtgctcaatttactaaagttttccgagaattatttggaggcggtaatgcagattta
attttaaccaatccagaagatttacttggaacgggtattgaaattgtcgctcaaccacca
gggaaaaagttacaagcacttagcttattatctggtggagaaagagcgctaactgctatc
gctttgttgttcgctatcttaaatattcgtcctgtacctttctgtatactagacgaagtg
gaagctgcattagatgaatcgaatgttgttcgttacagtcaatatttgaagaagtttagt
caagacacacaatttatcgtgataacacatcgaaaaggcacgatggaaggtgcagacgtc
ttgtatggtattacgatgcaagaatctggtatatcaaaattagtttccgttaaactcgaa
gaagaagaacgagaacttgtgacacaagggagcgcgaaaaattga
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