Paenisporosarcina cavernae: D3873_05130 Help Entry D3873_05130       CDS       T05647                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism paek  Paenisporosarcina cavernae Pathway paek03018   RNA degradation Brite KEGG Orthology (KO) [BR:paek00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     D3873_05130  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:paek03019]     D3873_05130 Messenger RNA biogenesis [BR:paek03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      D3873_05130 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_C RNase_J_b_CASP RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 DUF2187 Gemini_AL1_M Pantoate_ligase Motif Other DBs NCBI-ProteinID:  AYC29292 UniProt:  A0A385YUQ4 LinkDB All DBs Position 1025675..1027342 Genome browser AA seq 555 aa AA seqDB search MTKKKNELIRVIPLGGVGEIGKAMYVVEIDEELFIVDSGLMFPEDEMLGIDIVIPDMTYL EEQKDRIKGIFLTHGHEDAIGSIAYLLNKVKAPVYGSKLTIALAKEHLKEGPVANQVKFH EVTSRSRMNFDSTHVTFFHTTHSIPDSLGIVFHTSEGAIVHTGEFKFDQSAKGSYKPDIA KMANLGEQGVLMLLSDSTEAERPGYTTSETVIEEQLAETFHSVKGRILVAVYSSNFIRIQ QVLDQAFACNKKVALVGKTLENVFQVGHKLGYLHVEEDALISIRDVNKYEDDQLVIIVSG NQGEPLEALEKMGRKHHRDVKMKDTDTVLITFTPSPGMEVAMYQTMNHLAKAGAKVLTSS KKVHVSGHGSQEDLKMMLNLMKPKYFIPIQGEYRMLMAHSKLAQETGMLKSQIFIADKGD IVEFKSGKVRMSGRVNAGNVLIDGIGVGDVGNIVLRDRKLLSQDGIFIVVVTLNRATKQI ASGPEILSRGFVYVRESEKLMDESTELVRKIVEKYVNKESFEWTNIKQEIRDTLNSYLFQ QTKRRPMIIPIIMEY NT seq 1668 nt NT seq  +upstreamnt  +downstreamnt ttgacaaagaaaaaaaatgagttaatccgagtaattccccttggaggcgttggggaaatc ggaaaagccatgtatgtggttgaaattgatgaagaactatttattgtagatagtggcctt atgtttccagaagatgaaatgttaggtattgatattgtgattcctgatatgacgtattta gaagagcaaaaagatcggattaaagggatctttttgacacacggtcatgaagatgcaatt ggctctatcgcttatttgttaaataaagtgaaagcaccggtatatggttctaagttaacc attgctctagcaaaggagcacttaaaggaaggcccagttgccaaccaagtgaaattccat gaagtaacaagcagaagccgtatgaactttgattctacgcatgtaacatttttccacacc actcatagtatccctgattctcttggaattgtgttccatacgtctgaaggagcaattgtt cacacgggcgaatttaaatttgatcaatctgcaaaaggaagttataaaccagatattgcc aaaatggcaaacttaggcgaacaaggcgtgttaatgttactgtctgattcaaccgaagca gagcgacctggatatacaacctcagaaacggttattgaagagcaactagcagagacattt cattctgtaaaaggacggattttagtcgctgtctattcttccaactttatacgtattcaa caagtgttagatcaagcgtttgcttgtaacaagaaagttgcactagtagggaagacgctt gaaaatgtcttccaagtaggacacaagcttggctatttacatgttgaagaagacgcgcta atttccattcgagatgttaacaaatatgaagacgatcaactcgttattatcgtctctggt aatcaaggtgaaccattagaagcgcttgaaaaaatgggcagaaaacatcaccgcgacgtt aaaatgaaagacacagataccgtactcatcacatttacaccttcccctggcatggaagta gcgatgtatcaaacaatgaatcatcttgcaaaagcgggtgcgaaagtacttacctccagc aaaaaggtgcatgtttcaggacatggtagtcaagaagatttaaaaatgatgctgaattta atgaagccgaagtactttattccaattcaaggagagtaccgtatgttgatggctcattca aagttggctcaagaaacaggcatgcttaaatcacaaatttttattgcagataaaggcgat attgttgaatttaaaagtggaaaagttcgaatgagtggtcgcgtaaatgctggcaatgtt cttatcgatggaatcggcgtaggagacgttgggaatatcgttttacgagatcgtaaattg ttgtctcaagacggaatttttattgttgtggttacacttaatcgagcgacgaaacaaatc gcttcaggaccagagatcctctcacgtggatttgtctacgtaagagagtctgagaagtta atggatgaatctacggagcttgttcgtaaaatagtcgagaagtatgtgaataaagaatcg tttgaatggacaaacattaaacaagaaatccgtgatacgttaaattcttatttattccaa caaacgaaacgacgtccaatgattatcccaattatcatggaatattaa

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