Paenisporosarcina cavernae: D3873_06005
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Entry
D3873_06005 CDS
T05647
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek00300
Lysine biosynthesis
paek00470
D-Amino acid metabolism
paek01100
Metabolic pathways
paek01110
Biosynthesis of secondary metabolites
paek01120
Microbial metabolism in diverse environments
paek01230
Biosynthesis of amino acids
Module
paek_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D3873_06005 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D3873_06005 (dapF)
Enzymes [BR:
paek01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
D3873_06005 (dapF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Lipase3_N
Motif
Other DBs
NCBI-ProteinID:
AYC29457
UniProt:
A0A385YU51
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All DBs
Position
1195687..1196688
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AA seq
333 aa
AA seq
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MINETSGRGKTMKISLKKMHGSGNTFYVLWTEDFAHSLWHEMAIKLCSTSWDGGADGLLL
ISSSASADVKMTVINADGSYAKMCGNGLRIVAREVLESLDVLQASIETEEVTLHVKKTTP
IFEQQDAFAVEIKPITFSLSDIPMTYGNNDTLINSIIPEIHDSIHFSVLAVPNPHLVGLV
PIQYIESRVFQEKIGTQLNESRSLFPEGVNLSFMHPVDEMTIFVRTFERGVGFTNACGTA
MSASALVAYQSKLVESTKVRVINPGGFVECHLSEDQQSVFLIGNASLIETLEVTIGSDET
ISILSKTIAHDEMDDYERWKDYAENMVKQKWRK
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgaaacaagtggaaggggaaaaaccatgaagatatcgttaaaaaaaatgcat
ggctcaggtaataccttctatgttttatggacggaagattttgctcattccctttggcat
gagatggcgataaagttatgttcaacatcgtgggacgggggagcagatggtcttttactc
atttcttcttccgcttctgcagacgtaaaaatgacggtaataaatgccgatggctcgtat
gcgaaaatgtgtggaaatggtcttcgtattgttgcgagggaagtgcttgaaagcttagac
gttcttcaagcatccattgaaacggaagaagtaacacttcatgtgaaaaagacgactcca
atattcgaacaacaagatgcatttgcggttgaaataaaaccaattacattctcgctctct
gatattcccatgacctatggaaataacgatacattgatcaatagcataatcccggaaata
cacgattcgattcatttttcagttctagcagttcctaacccacacttggttggccttgtg
ccgattcaatatatagaatctcgtgtatttcaggagaaaattggcacacaattaaatgaa
agtcgctcgttatttccagaaggtgtcaatcttagttttatgcatcctgtagatgaaatg
accatttttgttcgaactttcgaaagaggtgttggcttcacgaacgcttgtggtactgct
atgtcagcgagtgcacttgttgcctatcagtcaaaactagtggagagcacgaaagttcgt
gtgattaacccaggtggctttgtcgaatgccatctatcagaagatcagcaatcggttttt
ttaataggaaatgcgtctttgatagaaacgttagaggttacaattggttctgatgaaact
atttctattttgtctaagaccattgcgcacgatgaaatggatgactatgaaagatggaaa
gattatgcggaaaatatggtgaaacaaaaatggagaaaatag
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