Paenisporosarcina cavernae: D3873_07920
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Entry
D3873_07920 CDS
T05647
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03030
DNA replication
paek03410
Base excision repair
paek03420
Nucleotide excision repair
paek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3873_07920 (polA)
03410 Base excision repair
D3873_07920 (polA)
03420 Nucleotide excision repair
D3873_07920 (polA)
03440 Homologous recombination
D3873_07920 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paek03032
]
D3873_07920 (polA)
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_07920 (polA)
Enzymes [BR:
paek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3873_07920 (polA)
DNA replication proteins [BR:
paek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D3873_07920 (polA)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D3873_07920 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3873_07920 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
HHH
Motif
Other DBs
NCBI-ProteinID:
AYC29825
UniProt:
A0A385YSK4
LinkDB
All DBs
Position
complement(1555083..1557707)
Genome browser
AA seq
874 aa
AA seq
DB search
MTKNKLVLLDGNSLAYRAFFALPLLTNDKGIHTNAVYGFTLMLQKILEDEKPTHLLVAFD
AGKTTFRHETFQEYKGGRQKTPPELSEQFPYIRKLLKAYGIREYELPNYEADDIIGTFSK
QSEQQGDTVIIVSGDKDLTQLASNTTSVYITKKGLTDLEVYTPEHVKEKYGLTPQQIIDM
KGLMGDSSDNIPGVPGVGEKTAIKLLVEYQSVENVLENIDSISGAKLKERLTENKEQAIM
SKQLATIETNAPIEINMEDLQYSGANEDDVIDIWKELSFNSLLEKSEYVQESQPIEEISY
EIVSSLTKDLLEKEMAIHIEMYDEHYHSAEILGFGLTGERQSYFITPDILSSSPDLKEWL
ESSDTKKLAVDSKATIAALHRLGIDVKGITFDFILASYIANPGISSADLQSLAQEFQYRN
INSEDQVYGKGAKKAIPSQTDLADHVIRKTYMVWQLKDAIQAKLRENNQYELYAELELPL
ALILGDMEAEGIKVDRKTLVDLGEELTRRISEVEEKINTLAGEKVNSNSPKQLGVLLFEK
LGLPVLKKTKTGYSTAADVLEKLEGQHEIIAPILLYRQLVKLNSTYIEGLLKEIGTDEKI
HTRYQQALTQTGRLSSIQPNLQNIPIRLEEGRKIRKAFIPSQKDWVLFAADYSQIELRVL
AHMSGDASLIEAFQQDMDVHTKTAMDVFHVSQEDVTSEMRRAAKAVNFGIVYGISDYGLS
QNLSITRKEAAEFIERYLETFPGVKQYMHDIVQDAKQKGYVQTIMNRRRYLPDITSSNFN
LRNFAERTAMNTPIQGSAADIIKKAMIDMDHRLKAENLQAKMLLQVHDELILEAPKEELE
LLQKLVPEVMEHAVKLNVPLKVDAAFGNTWYETK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaataaactagtcttattagatggaaatagtttagcgtaccgagcatttttt
gcgttacctttactgacgaacgataaaggaatacatactaatgcggtatatggatttacg
ctcatgctgcaaaaaatcctggaagacgaaaaaccaacgcatcttttggtagcttttgat
gcggggaaaactacatttcgccatgaaacgtttcaggaatataaaggtggacgacaaaag
acacctcctgagttatccgagcaatttccttacattcgaaagcttttgaaagcatacggg
attagagaatacgaattaccaaattatgaagcagatgatatcattggtacgtttagcaag
caatcagaacaacaaggagataccgtgattatagtcagcggcgataaagatttaactcaa
ctcgcatctaacacgactagtgtatacattacgaaaaaagggcttaccgatttagaagtg
tatacacctgaacatgtaaaagaaaagtatggacttacaccgcaacagattattgatatg
aaaggcttgatgggggattcttctgataatattcctggtgtgccaggagttggagaaaaa
acagctattaaattgcttgttgagtatcaatctgtggaaaatgtgttagaaaatatcgac
agcataagtggtgctaaattaaaagaacgcttaaccgaaaataaagagcaggcaatcatg
agcaaacaacttgcaacgattgaaacaaatgcgccaattgagatcaacatggaagacttg
caatatagtggggcaaatgaagacgatgtcatcgacatttggaaagagttatcgttcaat
tccttattagaaaaaagcgagtatgttcaagaatcacaaccaattgaagaaatttcgtac
gagattgtttcaagcttgacgaaagatttacttgaaaaagaaatggcaatacacattgaa
atgtatgatgaacactatcacagcgccgaaattctgggatttggattgaccggagagaga
cagtcgtattttattactcctgacatactctcctcctcaccagatttaaaagaatggtta
gaatcaagtgataccaaaaaattagcagtagactcaaaagcaacgattgcagctctccac
cgattgggaatcgatgtgaagggtatcacattcgattttattttagcatcctatattgcg
aatccaggaatctcatcagctgatttacaaagtcttgcgcaagagttccagtatcgaaat
atcaacagtgaagatcaagtttatggaaaaggtgctaaaaaagcaattccatctcagact
gatttagcggaccacgttattcgtaaaacgtatatggtttggcaattaaaagatgccata
caagcaaaacttcgtgaaaataatcagtatgagctatacgctgaactggaacttcctctt
gctttgattttaggagatatggaagcagaagggatcaaagttgatcggaaaacactagta
gatctaggggaagaattaactcgacgtatttcagaagtagaagagaaaattaatacactt
gctggtgaaaaagtaaatagtaattcaccaaagcaattaggtgtgttgttgtttgaaaaa
ttaggactgcctgtattgaaaaaaacaaaaacaggctactccactgcagcagatgtactg
gaaaaattagaaggccagcatgaaattattgcgccaattcttttgtatcgacagttggta
aaattaaattcgacttacattgaaggattactaaaagagattggaacggatgaaaaaatt
catactcgttatcaacaagccttaacgcaaacgggtagactaagttctattcaaccgaat
ttacaaaatataccaatacgtttagaagaaggaagaaaaattagaaaagctttcattccg
tctcagaaggattgggtgcttttcgctgcggattattctcaaatcgaattacgtgtactt
gcacacatgtctggtgacgcatcattaattgaagcatttcaacaagatatggacgtccat
acgaaaacagcaatggatgtatttcacgtgtcccaagaagatgtaactagtgaaatgaga
cgcgcagctaaagcagtaaatttcggcattgtatacggaattagtgattacggcttgtcg
caaaatttatccattacgagaaaagaagcggcagaatttatcgaacgttatttagaaact
ttccctggtgttaaacaatacatgcacgatattgtgcaagatgcaaaacaaaaagggtat
gttcaaaccattatgaatcgcagaagatatttaccagatatcacaagctcgaacttcaac
ttacggaactttgcagagcgaactgcgatgaacacaccgatacagggtagtgctgcagat
attataaaaaaagcaatgattgatatggatcatcgtttaaaggcagagaatcttcaagcg
aagatgttgctacaagtacatgatgaattaattttagaggctcctaaagaagaactagaa
ctattacaaaagctcgttcctgaagtgatggaacatgccgttaagttaaatgtaccttta
aaagtagatgcagcttttggcaacacttggtacgaaacaaagtag
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