Paenisporosarcina cavernae: D3873_07990
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Entry
D3873_07990 CDS
T05647
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03030
DNA replication
paek03430
Mismatch repair
paek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D3873_07990 (dnaE)
03430 Mismatch repair
D3873_07990 (dnaE)
03440 Homologous recombination
D3873_07990 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paek03032
]
D3873_07990 (dnaE)
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_07990 (dnaE)
Enzymes [BR:
paek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D3873_07990 (dnaE)
DNA replication proteins [BR:
paek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D3873_07990 (dnaE)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D3873_07990 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP
tRNA_anti_2
POT1
MamS_MamX
BOF
Motif
Other DBs
NCBI-ProteinID:
AYC29839
UniProt:
A0A385YSP5
LinkDB
All DBs
Position
complement(1571212..1574292)
Genome browser
AA seq
1026 aa
AA seq
DB search
MTTIYPFITTAADLLHSTIRLPELASFLQKNDVQKAAIINRSLYGILPFYETMIKASIEP
IIGLSIQVEVEENELDLHLYAEDELGYKQLLKLSSARETREIDAIPLKWLIGYQSGLRIV
IPFSPTKTKEELDVWIHTLHVIREKIQVPLAVGIIRLEGVASAFEDDVEQFCHQSNIIIT
AHYESYYLHQEDAFGYEVARNIAGGTKLSDETRYELPHRSHFVPSAENWTKWYRDKPEWI
LGATRFFDACHVVLDLSSKHMPKFPLATTHSSADLLWELCQNGLQKLVENPSTIYHTRLK
HEFTIITSMGFEDYFLIVADFMDFARKNHILTGPGRGSSAGSLIAYCLYITQVDPIQHGL
LFERFLNPERVTLPDIDIDFLDHRRNEVISYVAKKYGQDYVAQIMTYGTLSAKAVARDVG
RVFHFDGSILERISSFIPSRVGITLAEARKENANFDKWIASDDMHEKWWEACLQLEGLPK
HVSTHAAGVVLSPKPLVEYVPIQKGQDTIYLTQWPMKEVEQSGLLKMDFLGLRNLSLLER
IRYLIYADQKKWMKFDEIPFDDAKTLTMLQQGDTLGVFQLESEGMRKTLREVMPTSFSDI
VAINALFRPGPMENIPLFARRKKGLEKVHYQHPLLEPILKETYGIIVYQEQIMQIAAQIA
GFSYGQADLLRRAVSKKNRQLLEEQRAAFSHGAMNNGIQENVANELFQLIVRFADYGFPK
SHAVAYSVISFQLAYFKANYPAYFYGALLASVSGNADKIAEIQLEMNRYDVELLGPSIFK
SDYSFRVESGKIRYGLQSIKGVSTNFAQLLLSVRKERENPWQDLFDLAVSLSASQFSRKL
IEPFIYAGALDDFGKDRSVLLATLDAAVKYAELVRPNMETDLFSGSVQSFGKPKYVKASD
MPKSKKLQFEKETLGIYISSHPVVEWKSMQQKEFPTIYETTKLPVGKVVSIAGMILEVKS
IRTKKGESMCFFHLQDESGDISVTMFPKEYANLSKFIQSGEIIEVRGKLDQRQGALQLIV
QNIENQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
gtgacaactatttatccattcatcacaactgctgccgatttgttacacagtaccattcgg
ctaccagaacttgcttcctttttacaaaaaaacgatgtacaaaaagcggctatcatcaat
cgaagtttgtatggaatcttaccgttttacgaaacgatgattaaagcctcgattgaacct
attatcggcctaagtattcaggtggaagtagaagaaaatgagcttgaccttcatttatac
gcggaagatgaacttgggtataagcaattgttaaagctttcaagtgcccgtgaaactcgg
gaaatagatgcaataccacttaaatggttgattgggtaccaatccggattgcggatcgtc
attcctttttcccctactaaaactaaagaggaattggacgtgtggattcacactttacat
gtcattcgggaaaaaatacaagtaccattagcagtgggaataattcgcttagaaggtgtt
gcatctgcatttgaagatgacgtggaacaattctgtcaccagtccaatataatcatcact
gctcattatgaaagttattatttacaccaagaagatgcttttggatacgaagttgcacgc
aatattgcaggtggaacgaaactttctgatgaaacacgatacgaattgccccatcgctcc
cattttgtcccttctgctgaaaattggacgaaatggtatcgagacaaaccggaatggatc
ttgggagcaactcggtttttcgatgcatgccatgtggtcctcgatttatcttccaagcat
atgccgaaatttccactagctactacacactcatctgctgatttgctatgggaactgtgc
caaaatgggttgcaaaaattagtggaaaatccttctactatttatcacactcgattaaaa
cacgaatttacgattattacctctatggggtttgaagactattttttaatcgtagctgat
tttatggattttgctcggaaaaatcatattcttacaggtccgggtagaggatcttcagca
ggttcgttaatcgcttattgtttatatataacgcaagtggatccgattcagcacggactg
ctatttgaacgttttttgaatccagaacgggtgacattgcctgatattgatatcgacttt
ttagatcatcggcgaaacgaagtcatttcctatgtggcaaaaaaatacggacaagattat
gtcgcgcaaattatgacatacggaacgctaagtgccaaagcagttgcccgagatgtagga
agagtctttcattttgatggatcgattctcgaacgaatctcttcttttatacctagtaga
gtcggtataacccttgcggaggctagaaaagagaatgccaattttgacaaatggattgca
agtgacgacatgcatgagaaatggtgggaagcgtgtctgcaattagaagggctcccaaaa
catgtgtcgacacatgctgcgggtgtcgttctttccccaaaacctttagtagaatatgtg
ccgattcaaaagggacaagatactatttatttaactcagtggccaatgaaagaagtggaa
caaagcggcttgctgaaaatggattttttggggttacggaatttatcattattagagaga
atacgttatttaatctatgccgatcaaaaaaagtggatgaagtttgatgaaattccattt
gatgatgcaaaaacgctcacgatgttacaacaaggggatacacttggcgtttttcaatta
gaatcagaaggaatgagaaagacattgcgtgaagtcatgccgacatctttctccgatatt
gttgcaattaatgcgttgtttcgaccaggaccaatggagaatattcctctctttgcaaga
cgtaaaaaagggctcgaaaaagttcactaccagcatcccttattagaaccaatcttaaaa
gaaacgtacggtattattgtctaccaggaacaaatcatgcaaatcgctgctcaaatcgct
gggtttagctatggccaagccgatttgttgagaagagcagtaagtaaaaaaaaccgtcaa
ttattagaagagcaacgtgcagcatttagtcatggtgcaatgaataatggtattcaagaa
aatgtagcaaatgagttgtttcaactcattgttcgttttgctgattacggatttccaaaa
agtcatgcggttgcttatagtgtcatttcgtttcaactagcttattttaaagctaattat
ccagcgtatttttacggagcattacttgcatcggttagtggaaatgccgataaaattgcg
gaaatacaattagaaatgaatcggtatgacgtggaacttttaggtccaagtatttttaag
agtgactatagtttccgagtagaatctggaaaaattcggtacggtcttcagtccataaaa
ggggtgtcgactaattttgcacagttgctgttgtctgttcgaaaagaacgagaaaatccg
tggcaagatctatttgacttagctgtcagtttatctgcttcccaattttctcgaaaacta
atagaaccattcatttacgctggagcccttgacgatttcggtaaggaccgttctgtgtta
ttagcgactttggatgctgcagttaaatatgcagagttagttcgacccaatatggaaact
gatttgttttcaggttctgtccagtctttcggaaaacctaaatatgtgaaagcttctgat
atgccaaaaagtaagaagctacaatttgaaaaagagacgttgggaatttatatttctagt
catccagtcgtagaatggaaatcgatgcaacaaaaagaatttccaactatttatgagacg
acaaaacttcctgtaggtaaagtggtgagcatagctggaatgattctggaagtaaaatct
attcgcacaaaaaaaggagagtccatgtgtttcttccacttgcaggatgaatcgggggat
atctctgtcacgatgtttccgaaagaatacgcgaacttaagtaaattcatccagagtggt
gaaataattgaagttcgaggcaaattagatcagcgacaaggtgccttgcaattaatcgtg
caaaacatcgaaaatcaatga
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