Paenisporosarcina cavernae: D3873_09605
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Entry
D3873_09605 CDS
T05647
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
paek
Paenisporosarcina cavernae
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paek03019
]
D3873_09605 (rapZ)
Messenger RNA biogenesis [BR:
paek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D3873_09605 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_22
AAA_16
Myosin_head
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AYC30114
UniProt:
A0A385YU86
LinkDB
All DBs
Position
complement(1865776..1866660)
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AA seq
294 aa
AA seq
DB search
MDNSPSIDNQFVLITGMSGAGKTVAIQSFEDLGFFCIDNLPPALLMTFLKLMKESGKDMR
KVAAVIDMRGGDMFDSLIGTLDSLSKELQITPKIVFLDADDQTLVRRYKESRRSHPLAPA
GLPLDGIHKERQLLSELKGRANFIFQTSSLKPVQLREKIQQEFNSQESATFTVNILSFGF
KHGLPIDADLVFDVRFLPNPYYIENLRPLTGMNEEVSGYVLKFEETKVLIEKLTDLLRYM
IPLYKKEGKRQLVIAFGCTGGQHRSVTLAEYYGKLLGLDYDTVVTHRDIKLRKG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggataactcaccctcgattgataatcaatttgttttgatcacaggaatgtctggagca
ggaaaaacagtagctatccaaagttttgaggatttgggatttttctgtatcgataattta
cctccagccctattaatgacgtttttaaagttaatgaaagaatcggggaaggatatgcgt
aaagtcgcggctgttattgacatgcgcggcggagatatgttcgattccctcataggcacc
ctcgattctttatcaaaggaactgcaaattacaccgaaaattgtgtttttagatgcagat
gatcagacgctagtaagacgatacaaagagtctcgccgttcgcatccacttgcgccagca
ggtctaccgttagatggaattcacaaagagaggcaattattgtcagagttgaagggcaga
gcgaacttcattttccaaacatcgagtttaaaaccagtgcagttgcgtgaaaagatccaa
caggaatttaactcacaagagtctgcaacgtttacagtaaatattctgtcgtttggcttt
aagcatggtcttccgattgatgccgatttggtgttcgatgttcgtttcttgccaaatcca
tattatatcgaaaatttacgaccgcttacgggaatgaatgaagaggtaagtggatacgtt
ttaaaattcgaggaaacaaaagtgttaatcgaaaagttaaccgatttactgcgatacatg
attccgttgtacaagaaggaaggaaagcgtcaattagtcattgctttcggatgtacaggt
ggtcagcatcgttctgttaccttagcggaatactatggtaaactattgggactagattat
gatacagtggtcacgcatcgtgacattaagctgagaaagggctga
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