Paenisporosarcina cavernae: D3873_10735
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Entry
D3873_10735 CDS
T05647
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paek
Paenisporosarcina cavernae
Pathway
paek03420
Nucleotide excision repair
paek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D3873_10735 (pcrA)
03430 Mismatch repair
D3873_10735 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paek03400
]
D3873_10735 (pcrA)
Enzymes [BR:
paek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D3873_10735 (pcrA)
DNA repair and recombination proteins [BR:
paek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D3873_10735 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D3873_10735 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
DUF5809
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
AYC30301
UniProt:
A0A385YV02
LinkDB
All DBs
Position
complement(2080146..2082374)
Genome browser
AA seq
742 aa
AA seq
DB search
MEVLVKSLLNGMNPEQEKAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLVVEKDVYPSKIL
AITFTNKAAREMRDRVDGLLGNGTSQSMWVSTFHSMCVRILRRDIDRIGYNKNFSILDGG
DQQTVVKNVLKELNIDPKKYDPRSMLNAISSAKNEGIDADTFKGQINSANPYERTISEVY
SAYEKRLRRNQSLDFDDLIMMTTTLFKRVPEVLEFYQNKFQYIHVDEYQDTNKAQYELVQ
MLAKKFQNLCVVGDSDQSIYRWRGADIQNILSFEKDYPNAKVIMLEQNYRSTKHILKAAN
DVIQNNAGRYKKNLRTDNQSGDAIRLFKASNEQQEAQFIVKTIQELMAKENRPYDDFAVL
YRTNAQSRVMEEVLVKSNISYNIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARVINE
PKRNIGATSFERIATFALEQDRSILDALREVDFMGLAARAANSAAAFYELIHNFTQQQEY
LSVTELVEQVLDKTGYRNMLQTEKTIEAETRLENIEEFLSVTKTFEERSDDKSLIAFLTD
LALISDLDKAEEEEDKSKGQVILMTMHAAKGLEFPVVFIMGLEENVFPHSRSIGDDEEME
EERRLAYVGITRAEQKLYLTCASSRTLFGRTNYNGPSRFINEISPDILEEIGAEARVVRS
EGSRFGTSTTKTRAAVSRPTYKQSGGEKAGWQVGDKAKHGKWGVGTVVSVKGAGEAMELD
IAFPSPTGIKRLLAKFAPIEKV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtattagtgaaaagtttactgaacgggatgaatccagaacaggaaaaagccgtt
cgtacaacagaaggacctttgttaatcatggcaggggcaggttctggaaagacacgagtg
ttaacacatcgcattgcgtatcttgtggtagaaaaagatgtgtacccttcgaaaatttta
gccattacgtttaccaacaaagcggcacgtgaaatgcgtgatcgtgtggatggattactt
ggtaatggtacatctcaaagcatgtgggtatccacatttcactcgatgtgcgtacgcatt
cttcgtcgcgacattgaccgcattgggtataacaaaaacttctccatattagatggtgga
gatcaacaaactgttgtgaaaaatgtgttaaaagagctaaacattgatccgaaaaaatac
gatcctcgttcgatgctaaatgcgattagttctgcgaaaaatgaaggaattgatgctgat
acgtttaagggtcaaatcaattcggcgaatccgtatgaacgtacgatttccgaggtttat
agtgcatatgaaaaacgtcttcgtcgaaatcagtcactggattttgacgatttaatcatg
atgacaaccacacttttcaaacgcgtcccagaagtgttggagttttatcaaaacaaattc
caatacattcacgtggatgagtatcaggatacgaataaggcgcagtatgagcttgtgcaa
atgcttgcgaaaaagtttcaaaatctatgtgtcgtaggtgactccgatcaatcgatttac
cgctggcgtggagcagatattcaaaatatcctatcgtttgaaaaagattatccgaatgcg
aaagtaattatgcttgaacaaaattaccgttccacaaagcatattttgaaagctgcaaat
gacgtgattcaaaataatgcaggtcgttataaaaagaatttacgtacggataatcaatct
ggggacgctattcgtttatttaaagcctcaaacgagcaacaagaagcacaattcattgtc
aaaaccattcaagaactgatggcaaaagaaaatcgcccgtatgatgatttcgccgtccta
taccgcacaaatgcacagtctcgtgtgatggaggaagtgctcgttaaatcgaacatctcc
tacaatatcgtcggcggaacaaaattctatgatcgaaaagaaattaaagatttgttagcg
tatttacgactcatcgcgaataatgatgacgatttatcacttgcacgtgtgattaatgaa
ccgaaacgaaatataggagcaacttcttttgaacgaattgcgacgtttgcgttagaacaa
gatcgctccattttggatgctcttcgtgaagtcgattttatgggacttgctgcacgtgcc
gctaactcggctgctgctttttatgaattaatccataatttcacacaacaacaagaatat
ttgtctgtcaccgaactagtagagcaagttctggataaaacaggctatcgcaatatgtta
caaaccgagaaaacaattgaagcagagacacgtcttgagaatattgaagagtttttatct
gtaacgaaaacattcgaagaacgctccgatgataagtcccttatcgcattcctaaccgat
ttagctctcatttcggatttggacaaagcagaagaagaggaagacaagtcaaaaggacaa
gttatattgatgaccatgcatgcagcaaaaggattagaatttcccgtcgtttttatcatg
ggtctagaagaaaatgtattcccacactctcgttctattggagacgatgaagagatggaa
gaagaacgacgacttgcttatgtaggtattacgcgagcagaacagaaactctatttaact
tgcgcaagttcaagaacactctttggacgaacaaattacaatggtccatcccgctttatc
aatgagatttcacccgatatcctagaagaaatcggagcggaggcacgagttgttcgttca
gaaggttctcgttttggcacatctacaacgaaaactcgtgcagctgtatctcgaccaacc
tacaagcagtctggtggagaaaaagctggatggcaagttggagacaaagcgaaacacggc
aagtggggcgttggaaccgttgtcagcgtgaaaggggcaggagaagcgatggaattagac
attgccttcccaagtccgacaggcattaagcgtttactcgcaaaatttgcaccaattgaa
aaagtgtaa
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