Pseudomonas aeruginosa LES431: T223_03580
Help
Entry
T223_03580 CDS
T02970
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pael
Pseudomonas aeruginosa LES431
Pathway
pael03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pael00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
T223_03580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pael03400
]
T223_03580
DNA repair and recombination proteins [BR:
pael03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
T223_03580
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
T223_03580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
BCA_ABC_TP_C
AAA_23
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
cobW
Zn_ribbon_8
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHC63382
LinkDB
All DBs
Position
complement(741487..744330)
Genome browser
AA seq
947 aa
AA seq
DB search
MDKILIRGARTHNLKNVDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPRC
PDHDIPLEAQTVSQMVDQVLALPEGSKLMLLAPVIRERKGEHLAVFDEMRAQGFVRARVD
GKLYELDEVPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFETALSLADGIALVAPMDED
EDEDVEEIIFSARFACPVCGHSISELEPKLFSFNNPAGACPTCDGLGVKQFFDARRVVNG
ELTLAEGAIRGWDRRNVYYFQMLGSLAQHYGFSLEEPFDELGAEHQKVVLYGSGRENVDF
RYLNDRGDIVKRSHPFEGILPNLERRYRETESATVREELAKFLSTQPCPDCHGTRLRREA
RHVWVGDRTLPAITAMPVGEACEYAAGLSLTGRRGEIAAKILKEIRDRLQFLVNVGLDYL
TLDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLGTLTHLRNLG
NTVIVVEHDEDAIRLADYVVDIGPGAGVHGGQVVAEGTPDQVMNHPDSLTGKYLSGRKKI
AVPAKRTPRDKKKLLKLKGARGNNLQNVNLEIPVGLFTCITGVSGSGKSTLINNTLFPIT
ATALNGATTLEVAPYDSFDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFSGV
PEARSRGYGPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDIYVPCDVCKGKRYNRETLEI
RYKGKSIHEVLEMTIEEAREFFDAVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRV
KLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTA
DWLVDLGPEGGSKGGQIIANGTPEQVAEMPQSHTGHFLKPLLERDRA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtggataagatcctgattcgtggggcgcgtacccacaacctgaagaacgtcgacctcaca
ctgccacgcgacaaactgatcgtgatcaccggtctttccggttccggcaagtcttccctg
gctttcgacacgctctatgcggaaggccagcggcgctacgtggaatccctctcggcctac
gcccggcagttcctgtcgatgatggagaagccggacgtggacaccatcgaagggctgtcg
ccggcgatttccatcgaacagaagtccacttcccacaacccacgctccaccgtgggtacg
atcaccgagatctacgactacctgcgcctgctttatgcccgcgtcggtaccccgcgctgc
ccggaccacgacatcccgctggaggcgcagaccgtcagccagatggtcgaccaggtcctg
gccctgccggaaggcagcaagctgatgctgctggcgccggtgatccgcgagcgcaagggc
gagcacctggcggtgttcgacgagatgcgcgcgcagggcttcgtccgcgcccgggtcgac
ggcaagctctacgaactcgacgaagtgccgaagctggataagcagaagaagcacagcatc
gatgtggtggtggaccgcttcaaggttcgcgcggacctccagcaacgcctggccgagtcg
ttcgagaccgccctgtccctggccgacggtatcgccctggtagcaccgatggacgaggac
gaggacgaggatgtcgaggagatcatcttctcggcgcgcttcgcctgcccggtctgcggc
cactctatcagcgagctggaacccaagctgttctccttcaacaacccggccggcgcctgt
ccgacctgcgacggcctcggcgtgaagcaattcttcgacgcgcgccgggtggtcaacggc
gagttgaccctggccgagggcgcgatccgcggctgggaccggcgcaacgtctattacttc
cagatgctcggttcgctggcccagcattacggcttcagcctggaagaacccttcgacgaa
ctcggcgccgaacaccagaaggtggtgctctacggctccggccgggaaaacgtcgacttc
cgctatctcaacgaccgcggcgacatcgtcaagcgttcgcaccccttcgaaggcatcctg
ccgaaccttgagcggcgctaccgcgagaccgagtcggccacggtccgcgaggagctggcc
aagttcctcagcacccagccctgcccggattgccacggtacccgcctgcgccgcgaggcg
cggcatgtgtgggtcggcgaccggacgctgccggcgatcaccgcgatgccggtcggcgaa
gcctgcgagtatgccgccggactcagcctgaccggccgccgtggcgagatcgcggcgaag
atcctcaaggaaatccgcgaccgcctgcaattcctggtcaacgtcggcctcgactacctg
accctcgaccgcagcgccgacaccctgtccggcggcgaagcccagcgcatccgcctggcc
agccagatcggcgccggcctggtgggagtgatgtacatcctcgacgaaccctcgatcggc
ctgcaccaacgcgacaacgagcgcctgctcggcaccctcacccacctgcgcaacctcggc
aacacggtgatcgtggtcgagcacgacgaggacgcgatccgactcgccgactacgttgtc
gacatcggtccgggcgccggcgtgcacggcggccaggtagtggcggaaggtacgcccgac
caggtgatgaaccaccccgactcgctgaccggcaagtacctttccgggcgcaagaaaatc
gcggttccggccaagcgcaccccgcgcgacaagaagaagctgctgaagctgaaaggtgcc
cgcggcaacaacctgcagaacgtcaacctggaaatcccggtcggcctgttcacctgcatc
accggggtctcgggctccggcaagtcgacgctgatcaacaacaccctgttcccgatcacc
gccaccgcgctgaacggcgcgactaccctggaagtggcgccgtacgactcgttcgacggc
ctgcagcacctggacaaggtggtcgacatcgaccagagcccgatcggtcgtaccccgcgc
tccaacccggcgacctataccggcctgttcacgccgatccgcgaactgttttccggcgtg
ccggaggcccgctcgcgcggctacggtcccggccgcttctcgttcaacgtcaagggcggc
cgttgcgaggcctgccagggcgacggcgtgatcaaggtggagatgcacttcctgccggat
atctacgttccctgcgatgtctgcaagggcaagcgctacaaccgcgagaccctggagatc
cgctacaagggcaagagcatccacgaggtgctggagatgaccatcgaggaagcccgcgag
ttcttcgacgccgtccccgccctggcgcgcaagctgcagacgctgatggacgtcggcctg
tcctacatcaagctgggccagagcgcgaccaccctctcgggcggcgaggcgcagcgggtc
aagctgtcccgcgagctgtccaagcgcgataccggcaagaccctgtacatcctcgacgaa
ccgaccaccggcctgcatttcgccgacatccagcaactgctcgacgtgctccaccgcctg
cgcgaccacggcaacaccgtggtggtgatcgagcacaacctggacgtgatcaagaccgcc
gactggctggtcgacctcggccccgagggcggctccaagggtggccagatcatcgccaac
ggcacgccggagcaggtggccgagatgccccagtcgcacaccggccacttcctcaagccg
ctgctggaacgcgatcgcgcctga
DBGET
integrated database retrieval system
