Pseudomonas aeruginosa MTB-1: U769_02205
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Entry
U769_02205 CDS
T02951
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paem
Pseudomonas aeruginosa MTB-1
Pathway
paem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U769_02205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paem03019
]
U769_02205
Enzymes [BR:
paem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
U769_02205
Messenger RNA biogenesis [BR:
paem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U769_02205
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_25
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AHB53689
LinkDB
All DBs
Position
complement(478621..480540)
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AA seq
639 aa
AA seq
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MSFSSLGLSEALARAVEAAGYSQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPVL
ERLFPAGHPDREHRHGPRQARVLVLTPTRELAAQVHDSFKVYARDLPLNSTCIFGGVGMN
PQIQALAKGVDVLVACPGRLLDLAGQNKVDLSHVEILVLDEADRMLDMGFIHDVKKVLAK
LPPKRQNLLFSATFSKDIVDLANKLLHNPERIEVTPPNTTVERIEQRVFRLPAPQKRALL
AHLVTVGAWEQVLVFTRTKHGANRLAEYLTKHGLPAAAIHGNKSQNARTKALADFKANDV
RILVATDIAARGLDIDQLPHVVNYELPNVEEDYVHRIGRTGRAGRSGEAISLVAPDEEKL
LKAIEKMTRQRIPDGDAQGFDPEAVLPEVAQPEPREAPQKQPRRDKERRSSRERKPKDAQ
ASNPDSNVAAAQDGTEKPAGKRRRRGGKNKENREAGQAQQPRQSREARPAKPNRPPEVDG
NRDPEEFLDDDFDNFGNRADYVSPYQGQENKGRGRRGGQQKPQGGTGQQGRGQGQGQARG
KSQGAAQGGARGQGAGQGKAKKPRASKPRGQGRENASRMSDAPLREPSEYGTGKQPSRQP
VVINKRDLVRMDRFPTAEQLDELEPRRKGERPALLTRNR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcttccctcggactctccgaggcgcttgcccgcgctgtggaggctgcgggc
tacagccagcccactcccgtgcaacagcgggcgattcccgccgtgttgcaaggtcgcgac
ctgatggttgcggcacagaccggcaccggcaagaccggtggtttcgccctgccggtactg
gagcgcctgttccccgccggtcatcccgaccgcgaacaccgccacggcccgcgccaggcg
cgcgtgctggtactgaccccgacccgtgagctggccgcccaggtgcatgacagcttcaag
gtctacgcccgcgacctgccgctgaacagcacctgcatcttcggcggggttggcatgaac
ccgcagatccaggccctggccaagggcgtcgacgtactcgtcgcctgccccggccgcctg
ctcgacctggccgggcagaacaaggtcgacctgtcccacgtggaaatcctcgtcctcgac
gaagccgaccgcatgctcgacatgggcttcatccacgatgtgaagaaggttctcgccaag
ctgccgcccaagcgccagaacctgctgttctcggctaccttctcgaaagacatcgtcgac
ctcgccaacaagctcctgcacaacccggaacgcatcgaggtaacgccgccgaacaccacg
gtcgagcgcatcgagcaacgcgtgttccgcctgccggcgccgcagaagcgcgccctgctg
gcgcacctggtgaccgtcggcgcctgggaacaggtgctggtcttcacccgtaccaagcac
ggcgccaaccgtctcgccgagtacctgaccaagcacggcctgccggccgccgcgatccat
ggcaacaagagccagaacgcgcggaccaaggcgctggccgacttcaaggccaacgacgtg
cgcatcctggtggcgaccgacatcgccgcccgcggcctggatatcgaccagttgccccat
gtggtcaactacgagttgcccaacgtcgaggaagactacgtccaccgcatcggccgtacc
ggccgcgccggacgcagcggcgaggcgatctcgctggtggcgccggacgaagagaagctg
ctcaaggccatcgagaagatgaccagacagcgtattcccgatggcgatgcccagggtttc
gaccccgaggccgtgctgcccgaggtggcccagccggagccccgcgaggcgccgcagaag
cagccgcgccgcgacaaggaacggcgcagcagccgcgagcgcaagccgaaagacgcccag
gcgagcaaccccgacagcaatgtcgctgcggcccaggacggtaccgagaagccggccggc
aagcgccgccgtcgtggtggcaagaacaaggaaaaccgcgaggccggccaagcgcagcag
ccgcggcagagccgcgaagcgcgtccggccaagcccaatcggccgccggaagtcgacggt
aatcgcgatccggaagagttcctcgacgacgacttcgacaatttcggcaaccgcgccgac
tacgtcagcccctaccagggtcaggaaaacaagggacgcggacgccgcggtggccagcag
aaaccccagggcggcaccggccagcagggtcgtggccaaggccagggccaagctcgcggc
aagagccagggcgccgctcaaggcggcgctcgcggtcagggtgccggccagggcaaggcg
aagaaaccgcgcgccagcaagccgcgcggccagggtcgcgagaatgcctcgcggatgagc
gacgcgccgctgcgcgagccgtccgagtacggcaccggcaagcagccgagccgccagccg
gtggtgatcaacaagcgcgacctggtgcgcatggatcgcttccccaccgccgagcagctc
gacgagctggagccgcggcgcaagggcgagcgccccgcactgctgacccgcaaccgctaa
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