KEGG   Pseudomonas aeruginosa MTB-1: U769_05360
Entry
U769_05360        CDS       T02951                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
paem  Pseudomonas aeruginosa MTB-1
Pathway
paem02020  Two-component system
Brite
KEGG Orthology (KO) [BR:paem00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U769_05360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paem03021]
    U769_05360
Transcription machinery [BR:paem03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U769_05360
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 HTH_23 HTH_IclR HTH_24 DUF8658 Xre-like-HTH GerE HTH_7 TnsD HTH_40
Other DBs
NCBI-ProteinID: AHB54312
LinkDB
Position
complement(1144021..1144530)
AA seq 169 aa
MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEP
RAFLTTIARRVLCNHYRRQDVERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGL
PPLAKETFLLAQLDGLGYAEIATQLGISLSSVKRYMLKAAQRCYFAELP
NT seq 510 nt   +upstreamnt  +downstreamnt
gtgtcgagcgccgacctcgcccacgcggccgcgttgcataccctctacagcgaccaccac
cactggctcacgggctggctgcggcgccgcctcggctgcccgcagaacgccgccgacctg
gcccaggacaccttcgtcaaggtcctggtttcgcgccaggccgcgcgcatcgacgaaccg
cgcgccttcctcaccaccatcgcccgccgcgtgctgtgcaaccactaccgccgccaggac
gtcgagcgcgcctacctggaagccctggccagcctgcccgagcgggaagtccccagcgaa
gagacccgcgccatcgtcctggagaccctggtcgagctggaccgcctgctcgacggccta
ccgccgctggccaaggagaccttcctgctggcccagctcgacggcctgggctacgccgag
atcgccacgcagctgggcatctccctgagcagcgtcaagcgctacatgctcaaggctgcg
caacgctgctacttcgccgagctgccatga

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