Pseudomonas aeruginosa MTB-1: U769_06255
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Entry
U769_06255 CDS
T02951
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
paem
Pseudomonas aeruginosa MTB-1
Pathway
paem03410
Base excision repair
paem03430
Mismatch repair
paem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U769_06255
03430 Mismatch repair
U769_06255
03440 Homologous recombination
U769_06255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paem03400
]
U769_06255
DNA repair and recombination proteins [BR:
paem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
U769_06255
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U769_06255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U769_06255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AHB54492
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All DBs
Position
1338052..1339767
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AA seq
571 aa
AA seq
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MRIEPRPLPETLPDLGDLPPLLARLYAARGVRCAEELDKGLARLIPFQRLKGIEEGVALL
VDALEGGQRILIVGDFDADGATASSVGVLALRMLGAAWVDYLVPNRFEYGYGLTPEIVGV
ALEKRPDLLVTVDNGISSVDGVQAAKAAGLKVLVTDHHLPGPELPAADAIINPNQPGCEF
PSKAMAGVGVIFYVMLALRARLRELDWFARRGLKEPNLAELLDLVALGSVADVVPLDANN
RILVHQGLARIRAGRARPGLRALLEVAGRPPVRITSTDLGFILGPRLNAAGRLDDMSLGI
ECLLCDDEALARDMAVQLDQLNQDRKAIEQGMQREALAQLKELSLEQLPFGLCLFDADWH
QGVIGILASRLKERYHRPTIAFADAGDGSLKGSARSIPGFHIRDALDAVAARHPGLISKF
GGHAMAAGLSLPQENFGAFSAAFDAEVRRQLAEEDLAGRLLSDGQLSIQEFHLELARALR
QAGPWGQHFPEPMFHGVFQLVQQRIVGERHLKLVLKSECGSLQLDGIAFNIDREQWPNPT
VRWAELAYKLDVNEFRGQESVQLMIVHMAPR
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccccgccccctgcccgaaaccctgcccgatctcggcgaccttccgcca
ttgctggcacgcctgtacgcagctcgtggcgtgcgttgcgccgaggagctggacaagggc
ctggcgcggctgattcccttccagcggctgaaaggcatcgaggagggcgtggcgctgctg
gtggatgccctggagggcggccagcggattctcatcgtcggcgacttcgacgccgacggc
gccaccgccagcagcgtcggcgtgctggccctgcgcatgctcggcgcggcctgggtcgat
tacctggtgccgaaccgcttcgagtacggctacggcctgaccccggagatcgtcggcgtg
gccctggagaagcgtcccgacctgctggtgacggtggacaacggcatctccagcgtggac
ggcgtccaggcggcgaaagccgcggggctcaaggtgctggtcaccgaccaccacctgcct
ggcccggaactgccggcggcggatgcgatcatcaaccccaaccagccgggctgcgaattc
cccagcaaggccatggccggggtcggggtgatcttctatgtgatgctggcgttgcgggcg
cgcctgcgcgagctggactggttcgcccggcgcgggctgaaggaaccgaacctcgccgag
ctgctcgacctggtggcgctgggcagcgtcgccgatgtggtgccgctcgatgccaacaac
cgcatcctggtccaccagggcctcgcgcgcatccgcgccggccgcgcccggccgggcttg
cgcgcgctactggaggtggccgggcggcctccggtacggatcacctccaccgacctgggt
ttcatcctcggtccgcgcctgaacgcggcgggtcggctcgacgacatgtccctcggcatc
gaatgcctgctctgcgacgacgaagcgctggcccgcgacatggcggtgcagctcgaccag
ttgaaccaggaccgcaaggccatcgagcagggtatgcagcgcgaggcgctggcgcagctc
aaggagctgagcctggagcaactgccgttcggcttgtgcctgttcgacgccgactggcac
cagggcgtgatcggaatcctcgcctcgcgcctgaaggagcgttaccaccggccgaccatc
gccttcgccgatgccggcgacggcagcctgaaaggctcggcacggtcgattcccggcttc
cacatccgcgacgcgctggacgcggtagccgcccgtcatcccgggctgatcagcaagttc
ggcggccacgcgatggctgccggactatcgttgccgcaggaaaacttcggcgctttctcc
gccgccttcgatgccgaagtacgccgccaactggccgaggaggacctggccgggcgcctg
ctctccgatggccagttgagcatccaggagttccacctggagctggcgcgcgcgttgcgc
caggccggtccctggggccagcactttcccgagccgatgttccacggggtgttccagctg
gtgcagcagcggatcgtcggcgagcgtcacctgaagctggtgctgaaaagcgaatgcggc
tcgctgcaactggatggcattgccttcaacatcgaccgcgagcagtggcccaaccctacc
gtgcgctgggccgagctggcctacaagctcgacgtcaacgaattccgcggccaggaaagc
gtgcaactgatgatcgtccacatggcccctcgttga
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