Paenibacillus sp. FSL P4-0081: P40081_02040
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Entry
P40081_02040 CDS
T03332
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03420
Nucleotide excision repair
paen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P40081_02040
03430 Mismatch repair
P40081_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_02040
Enzymes [BR:
paen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40081_02040
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P40081_02040
MMR (mismatch excision repair)
Other MMR factors
P40081_02040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIQ27110
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Position
complement(431532..433868)
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AA seq
778 aa
AA seq
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MNKLLFHNIPLGATGEKIPQAKVASARTSRETVKPGDSDAAYFRRLEEGGILLNPPQISA
VRHHLGPLLTLAGAGSGKTSVLICRTGYLLSVRGIAPGRLLLLTFSSKAAAEMRERIALL
PGVDAGDAARLQARTFHSFFLYFLRRQGLRQDIFHETRRQHILLKQIMRQLGLPKDAYPP
ENLLTLLSSCKMNMGLPEDMPETTEAEKEMKAILALYEQWKTDNFKIDFDDVLLIAYRML
REQPALLLELQQKYQYVMVDEFQDTNALQYELVKMIAHPQDNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPNAKVITLDINYRSGPAIIGLGNGIIRHNSRRRAKTLQAAKSSGNPPRY
LRPQTADEEAEQIVEHIEREIGSGAREYRDYALLYRATSSNRAILELLLMRDIPYVDYGE
GQLLYEHWLISPVLDHLRLSVNRRNFAAMENILPTLYMSREKGMEHIRRMEAVQAKQGPL
IHLLSMPGMEDFKGTKLRERLDLIRGLSGLTPVQAIRQIRTVFYDYFIEANERHQATLHR
ETLKEMLDELEASAERFGTIPLFLEFIDNVTERNEQSRQPGLKEQGNRIALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEEGRLKDRKPAKASVTVVGSAAARAAAEAGIAALEEERR
LAYVAVTRAREELFISSPARHRGKKAEVSRFMLSAFRTAAPPQATAPAAGNRSTIVRSSY
SSGSSAARMHTVPVWSCSGKSCPGWTRMKAGGAEDHLVSKPCPLCKSAMQKSTREVPV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttttatttcataatataccgctgggcgctaccggcgagaaaatcccccag
gcgaaggttgcctccgcccggacgagcagggagaccgtgaagcccggagacagcgacgcg
gcttacttccgcaggctggaggaaggcggcattctgctcaatcctccgcaaatctcagcg
gtgcggcatcatctcggtccgctgctgacgctggcgggagcgggctccggcaaaacctcg
gtgctgatctgcagaaccgggtatttgctgtctgtgcgcggcatcgccccgggccggctg
ctgctgctcacgttctccagcaaggcagcggcagagatgcgcgagcggattgcactgctg
ccgggtgtggatgcgggcgatgccgcccgcctgcaggcccgcacgttccactcgttcttc
ctttatttcctgcgccggcagggactgcggcaggatatattccatgaaacccggcgccag
cacattctgctgaagcagatcatgcgtcagctcgggctgccgaaggatgcctatcctcca
gagaatctgctcaccctgctctcctcctgcaagatgaatatgggcttgcccgaggatatg
ccggaaacgacggaagcggagaaggaaatgaaggccattctcgccttgtacgagcagtgg
aagaccgataatttcaaaattgatttcgacgacgtgctgctgatcgcttaccggatgctc
cgggagcagccggcacttctgctggagctgcagcagaaataccaatatgtaatggtcgac
gaattccaggatacaaatgcgctgcaatatgagctggtcaaaatgatcgcccatccgcag
gacaacctgatggtggtcggagacgatgatcagaccatctattccttcaacggggcgcgc
agcgagttcatcctggagttcgagaagctgtatcccaatgccaaggtgatcacccttgat
atcaattaccgctccggaccggccattatcgggctcgggaacgggattatccgccataat
tcgcggcgccgggccaagacgctgcaagctgccaaaagcagcggcaatccgccccgctat
ctgcgtccgcaaacggcggatgaagaagccgagcagattgtagagcatatcgagcgtgag
atcggcagcggagcaagagaataccgcgattacgccctgttataccgcgccaccagcagt
aaccgggcaatcctggagctgctgctgatgcgcgatatcccttatgtcgactacggcgaa
ggccagctgctctacgagcattggctgatctcccctgtgctggatcatctgcgcctgtct
gttaaccgccggaacttcgccgcgatggagaatattctgccgaccctctacatgagccgg
gaaaaagggatggagcatatccgccgcatggaggccgtgcaggcgaagcagggcccgctg
attcacctcctgtccatgccgggcatggaggatttcaaaggtaccaagctgcgcgagcgg
ttggatctgatccgcgggctgagcgggctgacaccggtgcaggccatccgccagatccgc
actgttttctatgactatttcatagaagccaatgagcggcatcaggctaccctgcaccgg
gagacgcttaaggaaatgctcgatgagctggaggcatccgcagagcggttcggcacgatt
ccgctgttcctcgaattcatagataatgtaaccgagcgcaacgagcagagccgccagccg
gggcttaaagagcaaggcaaccggattgccctgatgactatccataaatccaaaggactg
gagttccccgttgtcttccttatcggggcttccgagggcattctgccgcatagctccgca
ctggaggagggccggctgaaggaccgcaagccggcgaaggcaagcgttactgtggtcggc
agtgctgccgccagagccgcagccgaggcaggaatagctgcactcgaagaggaacgcaga
ctcgcctatgtagccgttacccgggcccgcgaggagctgttcatcagctcgcccgcaagg
caccggggcaagaaggcagaggtctcgcgcttcatgctctccgccttccgcactgcggca
ccgcctcaggcaactgcaccggccgccggaaacagaagcactatagtgcgcagcagctat
tcgtccgggtcctccgcagccagaatgcatacagttcccgtctggagctgttccggcaag
tcctgcccgggctggacccggatgaaggcgggcggagccgaggatcaccttgtctcgaag
ccctgtccgctctgcaaatccgccatgcaaaagagcacccgggaagtccctgtataa
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