Paenibacillus sp. FSL P4-0081: P40081_04110
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Entry
P40081_04110 CDS
T03332
Name
(GenBank) metallophosphatase
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
paen
Paenibacillus sp. FSL P4-0081
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paen03016
]
P40081_04110
Enzymes [BR:
paen01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
P40081_04110
Transfer RNA biogenesis [BR:
paen03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
P40081_04110
Prokaryotic type
tRNA splicing ligases
P40081_04110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AIQ27475
LinkDB
All DBs
Position
897007..898233
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AA seq
408 aa
AA seq
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MAYQNIDGVRVWGNPDSGALAQAKTCAETGNVVQTLLMADHHKGYSQPIGGVVVYDGQIS
PSGVGYDIACGNKAVRTSLTVEDIRPRLANIMDEIARRISFGIGRVNNERVDHELFDDPD
WAVFMAVGRQKHDKLKALAQSQLGTVGSGNHFVDLFEEAGTGRVWIANHFGSRGFGHKTA
SGFLNLAAGRDFLANAPGEKMDQPPVLLDTSSELGDMYYRAMKLAGRYAYAGRDYVIRQV
LAILGAEADLEVHNHHNYAWKETHGGKEVVVVRKGATPSAPGQVGFIGGSMGDISVIVKG
KDSVENKDSYYSTVHGAGRIMSRTQAAGKMNWKTRTRSGGQITSTQMLEAVRDCGVELRG
AGTDESPFVYRKLQEVLDAHAGTIEVMHVLKPIGVCMAGADEFDPYKD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcaaaatatagacggcgtgcgggtctgggggaatcctgacagcggagcgctg
gctcaagcaaagacgtgtgcggaaacaggcaatgttgtgcaaaccctgctcatggcagat
catcataagggctacagccagccgatcggcggggtggtcgtatacgatgggcaaatctcc
ccgtccggcgtcggttatgatattgcgtgcgggaataaagcggtgcgaaccagcttaact
gttgaagatatcaggccccgattggcgaatattatggacgagatcgcccggagaatctcc
ttcggaataggccgtgttaataatgaaagggtcgatcatgaactttttgacgacccggat
tgggctgttttcatggcggtaggcagacagaagcacgacaaactgaaagctttggcacag
agtcagctaggtacggtcggcagcggcaatcacttcgtagatttgtttgaagaagccgga
acaggccgggtgtggatcgccaatcattttgggagcagagggttcggccataagacagcg
agcggtttcctcaacctggcagcgggcagagactttctggctaacgcccccggtgaaaag
atggaccagccgcccgtactgcttgatactagcagtgagcttggcgatatgtattacaga
gccatgaagctggccggacgctacgcctatgccggcagggattatgtgatccggcaagta
ttagccatcctgggagcggaagcggacctcgaagttcataaccatcataactatgcctgg
aaagaaacacatggcggcaaagaagtcgtcgtcgtccgcaaaggggcgaccccgtctgcg
ccgggccaggttggctttatcggcggcagtatgggcgatatatcggtgatcgttaaggga
aaagatagcgtggagaacaaagactcctactatagcaccgttcatggtgcaggacgaatc
atgagccggacccaggcggcaggcaaaatgaactggaaaacccgcacccgcagcggcggt
caaattacgtcaacgcaaatgctggaggcggttcgggattgcggtgttgagctgcgcggt
gcaggcacggatgaaagtccttttgtgtaccggaagcttcaagaggtgctggatgcgcat
gccgggaccatcgaggttatgcatgtgttgaagccgattggggtatgtatggctggggcg
gatgagtttgatccgtataaggattga
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