Paenibacillus sp. FSL P4-0081: P40081_06075
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Entry
P40081_06075 CDS
T03332
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
P40081_06075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_06075
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
P40081_06075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DUF7445
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AIQ27807
LinkDB
All DBs
Position
complement(1373475..1374467)
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AA seq
330 aa
AA seq
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MHTVWKGAISFGLVHVPVKMFSATEDKDISLRYIHKECGSPLSYVRKCPVCEKEVAWEEI
GKGYEYEKGKFVLFDKEELDQLTEESSKSITILDFVDLTEIDPIYFQKTYYLSPDQAGAN
AYRLLMEAMRQTGKIGIAKISIRSKSSLAAIRVLADCLAIETIYYPDEVRPVSQVPGLPE
PGIVNDKELDMAKLLISQLSTPFEPAKYTDDYRQRMLDLITHKIAGEEFHIAPARQENNV
IDLMAALQASIEAVQHIPSDPGPSLSGTGTGTGKKPRAAAAGKKKPAQANASGAPAPEPG
VPAVNEATGPIPVIAPKPKRRTAKSKVTGA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcataccgtttggaaaggagccatcagtttcgggcttgtgcatgttccggtcaaaatg
ttctccgctacggaagacaaggatatctcgctgcgttacatccataaagaatgcggaagc
ccgctatcctacgtgcgtaaatgccccgtgtgcgagaaggaagtggcctgggaagagatc
ggcaagggttacgaatatgagaagggcaagtttgtcttgttcgataaggaagagctggat
cagctaaccgaggagagcagcaagagcattacgattctggattttgtggatttgacggag
atcgacccgatttatttccaaaagacctattacctgtctcccgatcaggccggtgccaac
gcctaccgtctgctcatggaggcgatgcgccagaccggcaaaatcgggatcgccaaaatc
tccatccgctccaaaagcagtctggctgcgatccgcgtcctcgccgactgcctggcgatt
gaaaccatttattacccggacgaggtccgtccggtatcgcaggtccccggtctgccggag
ccggggatcgtgaacgacaaagagctggatatggccaagctgctgatctcccagctgtcc
acaccgtttgaacccgctaaatacacggacgattaccgccagcggatgcttgacctgatc
acgcacaagatcgccggtgaggaattccatattgctccggcacgccaggagaacaatgtc
atcgatttgatggctgccctgcaggccagtatcgaagctgtacagcatattccgtccgac
cccggaccttcactgtccggcacaggaaccggtacaggcaaaaagccgcgggcggctgcg
gccggcaagaaaaaaccggcacaggccaatgcctccggagcccctgcccctgaaccggga
gttccggcagttaacgaggcaactggcccgattccggtcatcgctccgaagccgaaacgc
cggacggccaagagcaaggtaaccggtgcctag
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integrated database retrieval system
