Paenibacillus sp. FSL P4-0081: P40081_08240
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Entry
P40081_08240 CDS
T03332
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P40081_08240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_08240
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P40081_08240
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P40081_08240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
RsgA_GTPase
AAA_21
AAA_16
AAA_29
DnaJ_CXXCXGXG
ATPase_2
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AIQ28172
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All DBs
Position
1825962..1828793
Genome browser
AA seq
943 aa
AA seq
DB search
MHQYITISGARENNLKNISLNIPRNQLVVFTGVSGSGKSSLAFDTLYAEGQMRYVESLSS
YARQFLGLMGKPDVDAIDGLSPAIAIEQKTTSSNPRSTVGTVTEIYDYLRLLWSKIGTPH
CPSCGRIIQRQSVDQIVEQIAGLPEGTKYEVLAPMVRNKKGAHQHIFEQAKLGGYVRVRV
NGVVHHVTDPISLDKNKKHSIEIVIDRLIVKDMDVQRLADSLEHAFALSGDLVIIHQSAS
GEEVTYSQSYACPHCEVSLPELSPRMFSFNNHEGACPACTGLGSHLKVDPDKIMPDTSRS
IQSGGIIANGWSNVKTNSFCKMYYEALGEKYGFDFSTPLQELSSEAMNVLLYGTNGEKLE
VHHPGDALRKYVKEAFEGIVNNLERRYRETPSEAMKKELEEYMSVLPCPHCHGDRLSPVV
LGVKVGGKSIAEFCHLPVEAAADFIAGLSLTAANAEIAGTILQEIDARFRFLNNVGLNYL
TLSRAAGTLSGGESQRIRLATQLGSGLMGVLYILDEPSIGLHQRDNDRLLLALKKMRDLG
NTLIVVEHDEDTIRQADWIVDIGPNAGIHGGEVVAQGTLEDILAESRSITGQYLSRSRQI
SVPEERRSGNGKQLTITGAAANNLKGITVSIPLGTLTCVTGVSGSGKSSLVNEILYKKLA
STLNRAHTIPGEHQSIDGIEHLDKVINIDQKPIGRTPRSNPATYTGVFDNIRTLFSLTNE
AKVRAYGPGRFSFNIKGGRCEACAGDGLIKVEMHFLPDVYVQCSICKGRRYSRETLEVHY
KGKSIADVLDLTAQEAVQFFGNIPEIRKKLEALCIVGLGYIKLGQSSTTLSGGEAQRVKL
AAELLKPATGSTLYVMDEPTTGLHFADVHQLIDVLHSLTDAGNTVVVIEHNLELIKNADY
IIDLGPEGGADGGEIVCTGTPEEVAVHETSYTGKYLNQEMGRR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgcatcaatatataacgataagcggagcaagagaaaataacctgaagaatatcagcctt
aacattccgcgtaatcagttagtagtgttcaccggagtgagcggctcgggtaaatcaagc
ctggcttttgatacgctctacgccgaaggacagatgcgttatgtggaatctttatcatcc
tacgcccggcaattcctgggactgatgggcaagccggatgtggatgccattgacgggctg
tcacctgccatcgccattgaacagaaaactacctcgagcaatccgcgttccaccgtagga
acggtaactgagatttatgactatttgcggttgttatggtctaagatcggaaccccgcat
tgtccgtcctgcgggcggatcatacagcggcaatccgtggaccagattgtagaacagatt
gcggggctgccggaaggaaccaaatatgaggtgctggcgcccatggtccggaacaaaaaa
ggtgcgcatcagcatatattcgagcaggctaagctgggcggatatgtccgtgtccgggtg
aacggcgtggtccatcatgtaacagaccccatttccctggacaagaataaaaagcactcc
atcgaaattgttatcgaccggctgatcgtgaaagacatggatgttcagcggctggccgat
tctctggagcatgcgtttgccctgtccggggatttggtgatcattcaccagagtgccagc
ggtgaagaggtaacgtattcgcagagctacgcctgcccgcattgtgaagtgtctttgccg
gagctatccccccgcatgttctctttcaataaccatgaaggggcttgcccggcctgtaca
ggtctgggttcacatctgaaggttgatccggataaaatcatgccggacaccagccgctcc
atccaatccggcgggattatcgcgaacggctggagtaatgtgaagaccaactctttttgc
aaaatgtactatgaggccttgggtgaaaagtacggcttcgacttcagcacaccactgcag
gagctatcatcagaggccatgaacgtgctgctgtacgggactaacggcgagaagcttgaa
gtgcaccatcccggtgatgcgctccggaaatatgtcaaagaagccttcgaaggaatcgtc
aataatctggagcggcgttaccgggaaactccatccgaagcgatgaagaaggaactggag
gaatacatgtccgttctgccttgcccccattgtcacggtgaccgtctgtcgcctgttgtg
cttggtgtgaaggtcggcggtaaaagcattgcagagttctgccatttaccggtggaggct
gcagcagactttattgccgggcttagcctgactgcggcgaatgcggagattgccggtacc
atcctgcaggagattgatgcccggttccggttcctgaataatgtcggactaaattatctg
acgctctcgagagctgccggaacgttatcaggcggtgaaagccagcgcattcgtctggcc
acacagctgggttccggtcttatgggcgtcctctatattcttgacgagccgtcgatcggc
ctgcatcaacgggataatgaccgactgctgctggctctgaagaagatgcgcgacctcggc
aatacgttaattgtagtggagcatgatgaagatacgatccgccaggcggactggattgtc
gatataggtccaaatgccggaatacacggcggagaggttgtggcgcagggtacccttgaa
gatatactggccgaatcccgctcgatcaccggccagtacctgtcccggagcagacaaata
tccgtcccggaagagcggcggagcgggaacggcaaacagctgaccattaccggagctgcc
gccaacaatctgaaggggattacggtatctattccgttaggcacgttaacctgtgtgacc
ggggtttccggctcaggcaaatccagtctggtcaacgaaatcctgtacaagaagctggct
tctacacttaatcgggctcatacgattcccggggaacatcagagcatcgacgggatagag
catctcgacaaagttattaatatcgatcagaagccgatcgggcgtactccgcgttctaat
cctgccacctataccggggtattcgataatatccgcaccttgttctcgctgacgaatgag
gccaaggttcgtgcctacggcccggggcggttctccttcaatatcaagggcggccggtgt
gaagcctgtgcgggagacggactgatcaaggtggagatgcattttctgccggacgtgtat
gtgcagtgcagcatttgcaaaggacggagatacagccgggagacgcttgaggtgcattat
aaaggtaaaagcatcgcggatgtgctggacttgaccgctcaggaagccgtccaattcttt
ggcaatattccggaaatccgtaaaaagcttgaggctctttgcatcgttggcctcggttat
atcaagctgggccaatcctccacgaccttgtcaggcggcgaggcgcagagggtgaagctg
gcggcagagctgcttaagcccgctaccggttccacgctatatgtgatggatgagccaacg
accggactgcattttgccgatgtgcaccagttaattgatgtcctgcactccctgaccgat
gccggcaacaccgtagtggtcattgaacataatctggagctgatcaagaatgctgattac
attattgatctcggcccggagggcggcgcggacgggggagagatcgtctgtacaggaact
cctgaagaggttgcggtgcatgagacgagctatacgggcaaatatctgaaccaagagatg
gggagaagatga
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