Paenibacillus sp. FSL P4-0081: P40081_11530
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Entry
P40081_11530 CDS
T03332
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P40081_11530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_11530
Enzymes [BR:
paen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
P40081_11530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P40081_11530
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P40081_11530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AIQ28737
LinkDB
All DBs
Position
2635601..2636443
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AA seq
280 aa
AA seq
DB search
MPELPEVETVRRTLNDLITGKQIEHVTVRLPRIIQRPDDIKAFAHMLAGHSVVTVERRGK
FLRFVFDGLVMVSHLRMEGRYGVYREGEPLDKHTHVIFHFTDGTELRYTDVRQFGTMHLF
QPGEDLLLKPLNKLGQEPLDAEFTLERFKQIVSKRSTKIKPLLLNQEYIVGIGNIYVDES
LHRAGIHPEEAANSLSEDHLARLHHAIVATLTEAVNAGGSSVKSYVNGQGESGNYQDQHR
IYGRKDQPCATCGTLIEKSVVGGRGTHYCPSCQPVPVQIR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgccggaagtcgaaacagtcagaagaacacttaatgatttaattacaggc
aagcagatagagcatgtcaccgtccggctgccgcggattattcagcggccggatgatatt
aaggcttttgcccatatgctggcaggccatagcgtagtaacggttgagcgcagaggcaag
ttcctgcggttcgtcttcgatggacttgtgatggtctcccatctgcggatggagggccgt
tacggtgtttaccgggagggcgagccgctggacaagcatactcatgtgattttccatttc
accgatggtacggagctgcgttataccgatgtgcgccagttcggaacgatgcatctgttc
cagccgggtgaggatctgctgctgaagccgctgaataagctgggacaggaaccgctggat
gcagagttcaccctggagcgtttcaagcagattgtctcgaagagaagcaccaaaattaag
ccgctgctgctgaatcaggaatatattgtcggtatcggcaatatttatgtggatgaatcc
ctgcaccgtgccggtattcatccggaagaagccgcaaactctctctccgaggaccatctg
gccaggctgcatcatgcgatcgttgcaaccttgacagaggcagtgaatgcgggaggctcc
tcagtgaaatcgtatgtcaacggccagggagagagcgggaattaccaggatcagcaccgc
atatacggacgcaaggatcagccgtgtgctacctgcggaacgttaattgagaaaagtgtt
gtcggcggccggggcacgcattattgtccgagctgccagcctgtaccggtgcagataagg
taa
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