Paenibacillus sp. FSL P4-0081: P40081_21935
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Entry
P40081_21935 CDS
T03332
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paen
Paenibacillus sp. FSL P4-0081
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paen03032
]
P40081_21935
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_21935
Enzymes [BR:
paen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P40081_21935
DNA replication proteins [BR:
paen03032
]
Prokaryotic type
DNA Topoisomerases
P40081_21935
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P40081_21935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Lar_restr_allev
Toprim_3
DUF7340
Toprim_2
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
AIQ30526
LinkDB
All DBs
Position
complement(4934738..4936834)
Genome browser
AA seq
698 aa
AA seq
DB search
MADALVIVESPAKAKTIGKYLGSKYIVKASMGHIRDLPKSQIGVEVENDFNPKYITIRGK
GSILKELKDASKKVKKVYLAADPDREGEAIAWHLAHALDLDNTQECRVVFNEITKQAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKIIMDREN
EISAFVPTEYWSITAKLGIRDSLFEAKFHKLNGDKKELGQESDVQEVLDAIKNSAFQVKE
VKEKERQRHPSAPFTTSSLQQEAARKLGFRASKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRLSATAQEEAKELILSKYGEKFVPETPRQYSKKAAGAQDAHEAIRPTSALREPDMV
KEFLSRDQFRLYKLVWERFVSSQMSSALLDTLSVDITAGTAIFRAVGSKVSFPGFMKVYV
EGNDDGTTDEEKYLPPLKAGDDLTKHDIEPKQHFTQPPPRYTEARLVKTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELIIEQMEEFFPEILDVEFTAHMEGDLDHVEEG
AEDWVKVLAQFYESFEKRLLYAEEEMKEIEIEDEVSDELCEKCGKPMVYKLGRFGKFLAC
SGFPDCRNTKPIIKDIGVSCPKCHEGKVVERRSKKGRVFYGCDQYPGCDFVSWDRPSVKP
CPVCGSWMVEKRNKQGTKLQCTSCDHTEAVLDNEELAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgttggttattgtagagtcaccggcaaaagcaaaaacgattggtaaatat
ctgggcagtaaatatattgtaaaggcatcaatgggacatatcagagatttgccgaaaagt
cagattggtgtggaagtggagaatgatttcaaccccaaatatataacgatccgcggcaaa
ggctctatcttgaaggaactcaaggatgccagcaaaaaagtgaaaaaagtctatctcgca
gctgacccggaccgcgaaggtgaagctattgcctggcatttggcgcatgcgctggatttg
gacaacacacaggaatgccgggttgtctttaatgagattacgaagcaggcagtgaaggat
gctttcaagactccgcgcaaaattaacatggatcttgtgaatgcccagcaggcccgccgt
attctggaccggctcgtcggatacaagattagccccctattatggaagaaagtcaaaaaa
ggcctgtccgcaggacgggtacaatcggtagctgtgaagattattatggaccgcgagaac
gaaatctctgcttttgttcccacagaatactggagtattactgcgaagctgggcatccgc
gattccctgttcgaagccaagttccacaagctcaatggcgacaaaaaagagctgggccag
gagagcgatgtacaggaagtattggatgctattaagaattccgccttccaggttaaagag
gtaaaagagaaagaaagacaacggcatccttccgctccgtttacaacaagctcactgcag
caggaagctgcgcgtaagctgggcttccgcgcatccaagaccatgtctgttgctcagcag
ctctatgagggggttgagctgggcaaggaaggcactgtcggtttaattacctatatgcgt
acggattccacccgtctgtctgctacggcccaggaagaagctaaggagctgatcctctcc
aaatatggtgagaagttcgttcccgagacaccgcgccagtattccaagaaagctgcggga
gcccaggatgcgcatgaagcgatccgtcctacctcggcgctccgtgagcctgacatggtc
aaagaattcctgagccgtgaccagttccgcctgtataaactggtttgggagcgttttgtt
tccagtcaaatgtcttcagccctgcttgatacgctgtctgtggatattacagcaggcact
gcgattttcagagccgtcgggtccaaggtttctttcccgggcttcatgaaggtatatgta
gaaggcaatgatgacggcacaacggatgaggagaagtatctgccgccgcttaaggccggc
gatgacttaaccaagcatgatatcgagccgaagcagcatttcactcagccgcctccaaga
tatacggaagcgcgtctggtcaaaacgctggaagaactggggatcggccgtccgagtacg
tatgcgccaacactggagacgatccagaagcgcggatatgtagcgattgaagagaagaag
ttcatgccgaccgaactcggtgagctgatcatagagcaaatggaagagttcttcccggaa
attctggatgtggaattcacagcccatatggaaggggatcttgaccatgtggaggaaggt
gctgaggactgggtgaaagtgctggcccagttctatgaatcttttgagaaacgtctcctc
tacgccgaagaagaaatgaaggaaattgagattgaagatgaagtttccgacgagctatgc
gagaaatgcgggaagccgatggtctacaagctgggccgtttcggtaaattcctggcctgc
tccggattcccggactgccgtaatacgaagccgatcatcaaggatatcggagtaagctgt
ccgaaatgtcatgagggtaaggttgtggagcgccgcagcaagaaaggccgtgtcttctac
ggctgcgatcagtatccgggctgtgactttgtatcctgggatagaccgtcggttaaacca
tgtcctgtctgcggctcctggatggtagagaagcgcaacaaacaggggactaagctgcaa
tgcacatcttgtgatcataccgaggcagtgctggacaacgaagagctggcagaataa
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