Paenibacillus sp. FSL P4-0081: P40081_29230
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Entry
P40081_29230 CDS
T03332
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
paen
Paenibacillus sp. FSL P4-0081
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_29230
Enzymes [BR:
paen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40081_29230
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
P40081_29230
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AIQ31761
LinkDB
All DBs
Position
complement(6561749..6565333)
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AA seq
1194 aa
AA seq
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MTVNFLIGRSGSGKTTTIWETVSSRLKTEPLGAPIIILVPEQGSFGAERGLLAAGNVKGS
IRAQTLSFSRLAYRVKQETGGSASLPISEEGKKMLIYKIVNRRKEELKLFGASSDRPGFV
ERLSDLHTELKRCCLGAGDLEEQLGRMRDALGGSPILAGKLEDLHLVFSELEQEMSQLYM
DQEDRLAELAEHIQDSGYIRGSEIWVDGFHGFTNQEFIVLRELMQYASGVTIALTLDRIY
PAGQAPHELELFHPAAVTYIKLRGMAEEMGLTVWDQLLAPPALPRFKDSPALAHLERGFQ
RRLRWNGAAGQAEEAVSIRAAASRRIEVEGVLREMLSLARDSGAKYGEMAVFMRNMSDYE
PLIAPLFQDFGVPFFLDQKLNELHHPLVEFIRSALDVVRRRWRYEDVFRCVKTELLLPLD
GSITRANMDELENYVLACGIHGYRWTDGRSWKGIPRLSLEGSEAVDEAMLARMEACRSAI
TGPLQAFEQRVKASRSGLELCRAVYLLLEDTEAARKLERMGAESLEQGRPEAAREHNQLW
GAVLDLLDQIAEMMGKERMEFELFAGVLETGLAELKMGLVPPALDQVLVGTMDRTRVSGV
KYAFLLGFNEGVVPAQFKEDGILSEGERLLLENAGMELAPGSSRKLLDERFLIYNALTTA
SRKLWISYALADDEGKALLPSEIIRQLQGMFPEGLDEKYLSGFPQGGEAAEDSMSAQTEA
VHMNFIGHPEQTLRMLMLQLRQWRQGVEIPRLWWDVYNWFAADGHADKPVNTQAAAAGQA
EVSMKLQLERLLGSLFYRNEGIRLKRETSLRLYGGSTLRGSVSRMEKFVACSFSHFASYG
LRLKERQLYKLQAPDIGQLFHAALSQMAQRLQKEGRSWGSMTAEECRREAGETVDRLSPL
LQGEILMSSKRYSYISRKLKNIVGRASVILGEHSRRGSFEPVGLELDFGPGKDLPPLRIT
LPNGCVMEVVGRIDRVDMAEGEQGILLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLL
TYSEQWLGQAALPAGALYFHVHDPLLTSANGMNREQAEQELMKRFKMKGLLTADREVVSL
MDTTLDKGYSSIVPVALKSDGSFYSSASVATPEQWGQLLSSVRSTISDIGTRITEGDVAI
QPYRIQQETACTFCSFRPVCQFDEAVEGNGYNNLSKPGKDVIWDLLSRKGGEKL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaactttttgatcggacgctcgggcagcggcaagacaactacaatatgggag
acggtatcctcacggctgaagacagagccgcttggagcgccgataattatacttgtccct
gaacagggatcattcggtgcggagcgcggtctgttggctgcgggcaacgtgaagggcagc
atccgcgcccagacactcagcttctcgcggctggcctaccgggtgaagcaggagaccggc
ggcagcgcgagtctgccgatcagcgaggaaggcaagaagatgctgatctataagatcgtc
aaccggcgcaaggaggaactgaagctgttcggcgcctcctcggaccggccaggattcgtg
gaacggctcagcgacctgcacacggagctcaagcgctgctgccttggagcaggtgacctc
gaagaacagctcggcagaatgcgggatgccctgggaggaagtccgattctggccggcaag
ctggaagatctgcacctggtcttcagtgagctggagcaggaaatgtcacagctctacatg
gatcaggaggacaggctggctgagctggctgagcatattcaggattccggctatatccgg
ggatccgagatttgggtagacgggttccacgggtttaccaatcaggaattcatcgtactg
cgtgagcttatgcaatatgcttcgggggtgaccattgccctgacgctggacaggatctat
cccgcaggccaggcaccgcatgagctggagctgtttcacccggctgcggttacgtatatc
aagctgcgcggaatggccgaggagatgggccttacagtctgggatcagcttctggcgccg
ccagcacttccaaggttcaaggacagtccggctctcgcccatctggagcgtggattccag
cgccggctgcgctggaacggagcagccgggcaagcggaggaggcagtcagtatccgggct
gcggcctcccgccggatcgaggtcgaaggcgtgctgcgcgagatgctgagcctggccaga
gattcaggggccaagtatggtgagatggctgtattcatgcggaatatgagtgattatgag
ccgctgattgctccgctgttccaggacttcggcgttccgttcttcctggaccagaagctg
aatgagctgcaccatccgctggtggaattcatccgttccgctctggatgtagtccgccgc
cgctggcgctatgaggatgtgttccgctgcgtgaagaccgagctgctgcttccgctggac
ggaagtattacgcgcgccaatatggatgaactggagaattacgtgctggcctgcggtatt
cacgggtaccggtggactgacggccgttcctggaaaggcattccccgcctctcgctggag
ggcagtgaggctgtagatgaagccatgctggccagaatggaagcctgccggagcgcgatc
acaggaccgctgcaggcttttgagcagagggtcaaagccagccgcagcggcctggagctg
tgcagagcagtatatctgctgcttgaggacacagaggcggcgcgcaagctggaacggatg
ggggcggagtctctggagcagggacgcccggaagctgcccgtgagcataaccagctgtgg
ggggctgtgctggatctgctcgatcagattgccgagatgatgggcaaggaaagaatggaa
tttgaactgttcgccggcgtgctggaaacagggctggctgagctcaagatggggctagtc
ccgcctgcccttgatcaggtgctggtcggaacgatggaccgtacgcgggtgtcgggagtg
aagtatgccttcctgctgggcttcaatgaaggtgtggttccggcacagttcaaggaagac
gggattttgtccgagggagagcgtctgctgctggagaatgccggtatggagctggctccc
ggctcatcccgcaagctgctggatgagcgcttcctgatctacaatgcgcttacaactgcc
agcaggaagctgtggattagttacgcattggctgatgatgaaggcaaagcgctgctgccc
tcggagattatccgccagcttcagggcatgttccctgaagggctggatgagaagtatcta
tcaggattcccccagggaggggaggcagctgaagacagcatgtctgcacaaacggaagcg
gtccacatgaatttcatcggccatcctgagcaaaccctccgcatgctgatgcttcagctc
cggcagtggcgccagggggtagagattccccgcttgtggtgggatgtctataactggttt
gcggccgatggacatgcggacaaaccggtgaacacacaggcagcggctgctgggcaggca
gaagtctcaatgaagcttcagcttgaacggctgctgggctcgctgttctaccgcaacgaa
gggatcaggctgaagcgggagaccagcctgcggctgtacggcggctccacactgcgcggc
agcgtgtcgcgcatggagaaatttgtggcctgctccttctctcatttcgcttcttacggg
ctaaggctgaaggaacgccagctctataagctccaggccccggatatcgggcagctgttc
catgcggctctaagccaaatggcgcagcggctgcagaaggagggccgcagctggggcagc
atgacggccgaagaatgccgccgtgaggcgggtgagacggtagaccgtctgtccccgctg
ctgcagggcgaaattctgatgagcagcaaacgttacagctatatctcacgcaagctgaag
aatattgtcggccgcgcttcagtgatcctcggcgagcattcgcgcagagggagcttcgag
ccggtcgggctggagctggatttcggtcccgggaaggatctgcctccgctgagaattaca
ctgccgaacggctgcgtaatggaggtggtcggccggattgaccgtgtggatatggctgaa
ggcgagcagggtattctgctgcgggtcattgactacaaatcaagccagaaggatctcaag
ctgcacgaggtctactatggattgtcgctgcaaatgctgacctatcttgatgtgctgctc
acctattccgagcaatggcttggccaggctgcactcccggcaggcgcgctctatttccat
gttcatgatccgctgctaacctcagccaacggaatgaaccgggagcaggcggagcaggag
ctgatgaagcgcttcaaaatgaagggtctgctgacggctgaccgtgaagtggtctcactg
atggataccacactcgacaaaggctattcctctattgttccggtagcgctgaagagcgac
ggcagcttctacagcagcgcgtctgtagctaccccggagcaatggggtcagctgctgtct
tcagtgcggagcacgatttcggatatcggtacgcgtattacggaaggtgatgtggctatt
cagccttaccgcatccagcaggagactgcctgtaccttctgctccttccgcccggtctgc
cagttcgacgaggctgtggagggcaatggctacaataatctgagtaagcctggcaaagac
gtaatctgggatctgctgtcccgcaaaggaggagaaaaattgtga
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