Paenibacillus sp. FSL P4-0081: P40081_34420
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Entry
P40081_34420 CDS
T03332
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03420
Nucleotide excision repair
paen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P40081_34420
03430 Mismatch repair
P40081_34420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_34420
Enzymes [BR:
paen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P40081_34420
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P40081_34420
MMR (mismatch excision repair)
Other MMR factors
P40081_34420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Terminase_6N
ResIII
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AIQ32625
LinkDB
All DBs
Position
complement(7732014..7734377)
Genome browser
AA seq
787 aa
AA seq
DB search
MQLVNIQDAVSRLNPPQRQAVEATEGPLLIMAGAGSGKTRVLTHRIAWLIANRKAPPWAI
LAITFTNKAAREMQDRVSKLVGTEGRDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNCMKDLDIDTKKFEPKAIQAVISTNKNELITPAQYEQKIGDYFEGLVAKVYTK
YQQRLRSNNSLDFDDLIMKTIQLFKEVPEVLDFYQKKFKYIHVDEYQDTNRAQYMLCKML
AEGHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEAKTILLEQNYRSTSNILNAANGV
IALNTGRKPKKLWTDSDEGAKIKVFRGDSEHDEGYFVTGEISKNVKQGQAYQNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLLSNPDDDISLTRIINVPKR
GLGDTTVGKLAAAAASQGVSIFRALQTVDDLGFAGRTRNTLVEFYDMIEALHRMVEFLSV
TELTEKILELSQYRLELQNENTLESRSRLENIDEFLSVTMEFEKNNEDKSLVSFLTDLAL
IADIDSVNDEEERSDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNDELEEERR
LAYVGITRAEKQLFLSCARMRTLFGRTTANAPSRFLEEIPEELKEDTVKESDRFRRGGAE
VGGAYGGRGFGGGGGSRGNFGSRTAAAGNAPAGGGAASFGSGSSASAVPGAGRVVVTTGG
AQSAPGAGAAASAGFKAGDKVSHGKWGIGTVVAVKGSGNDTELQIAFPAPVGVKRLLAGF
APITKVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgttaacatacaagacgccgtaagccggctaaaccccccgcagcgtcaggct
gtagaagctaccgaagggcctttattgatcatggccggagcgggcagcggtaagacccgc
gtgcttacccaccggatcgcctggctgattgcgaaccgcaaggcaccgccttgggcgatt
ctggcgattacttttacgaacaaggccgcccgggagatgcaggatcgtgtctccaagctg
gtagggacggagggccgggatatttgggtatccaccttccactcgatgtgtgtgcggatc
ctgcggaaggatattgagcgaatcggcttcacttcgaacttctccattctggattcgacg
gaccagttatccgttatccgcaattgtatgaaggatctggacattgataccaagaaattc
gagccgaaggccattcaggctgtgatcagtacgaacaagaatgagctgattacaccggcg
cagtatgagcagaagatcggcgattatttcgaaggccttgtggccaaagtgtataccaag
taccagcaacggctgagaagcaataactcactggattttgatgacctcatcatgaagacg
atccaattgttcaaggaagttcctgaggtattggatttctaccagaagaagttcaaatac
attcatgtcgatgagtatcaggatacgaaccgggcgcagtatatgctctgcaagatgctg
gccgagggtcatcaccggatctgcgtagtcggggacagtgaccagtcgatctaccgctgg
cgcggggcggatatttcgaacatccttaatttcgaagaagactatccggaagccaaaacc
attctgctggagcagaattaccgttcaacctccaatattctgaacgcagccaatggtgtt
atcgcactcaataccggacgcaagccgaagaagctgtggaccgattcggacgaaggcgcg
aagattaaggtgttccgcggcgactccgagcatgatgagggatacttcgtcaccggtgag
atcagcaagaatgtgaagcagggccaggcctaccagaatcatgcgattctgtaccgtacg
aacgcccagtcacgtgtaatagaagaaattctgatcaaatcggatatcccttatcagatc
gtcggcgggatcaagttctacgaccgcaaagaaatcaaggatctgctggcgtatctgcgc
ctgctctccaatcccgatgatgatatcagcctgacgcggattatcaatgttcccaagcgt
ggcctcggggatacgactgtcggtaaattggcggcagcagcagcttcccagggagtatca
atcttccgtgcgctgcagacggtggatgatctgggctttgccggccggacgcgcaatacg
ctggtggagttctatgatatgatcgaagccctgcaccgcatggtggaattcctctcggtg
accgagctgacagagaagattcttgaactgtcccagtaccgactggagctgcagaatgag
aatactcttgaatcccgttcccgtctggaaaatatcgatgaattcctgtccgtaacgatg
gaattcgagaagaacaacgaggataagtcgctggtctccttcctgacggatctggcgctg
atcgccgacattgacagcgtgaatgacgaagaagagcgcagcgatgcggttgtgctgatg
acgatgcacagcgcgaagggcctggagttcccgaccgtgttcatcatcgggatggaagag
ggcgtgttcccgcacagccgtgccttccaggacaatgacgaactggaagaagaacgccgg
ttggcgtatgtgggcattacccgtgcggagaagcagctgttcctcagctgtgcacggatg
cgcacgctgttcgggcggacgaccgcgaatgcgccgtcccgcttcctggaggagattccg
gaggagctgaaggaagacaccgtgaaggaatcggaccgcttccggcgcggaggcgcggag
gttggcggtgcttatggcggccgcggcttcggcggaggcggaggcagccgcgggaacttc
ggcagccgcaccgctgctgccgggaatgcgccggcaggcggcggggccgccagcttcggc
agcggcagctcggcgagcgcggtgccgggcgcgggccgtgtcgtagtgacgaccggaggc
gcgcagagcgctccgggagcaggggccgcagcgtccgccggcttcaaggcgggcgacaag
gtctcccacggcaaatggggcataggcaccgttgtggccgtgaagggcagcggcaacgat
acggagctgcagattgccttcccggcgccggtgggcgtgaagcggctgctggccggcttt
gcaccgatcaccaaagttgaataa
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integrated database retrieval system
