Paenibacillus sp. FSL P4-0081: P40081_34550
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Entry
P40081_34550 CDS
T03332
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
paen
Paenibacillus sp. FSL P4-0081
Pathway
paen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
paen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P40081_34550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paen03400
]
P40081_34550
DNA repair and recombination proteins [BR:
paen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P40081_34550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P40081_34550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_21
RsgA_GTPase
AAA_25
BCA_ABC_TP_C
nSTAND3
DnaJ_CXXCXGXG
nSTAND6
cobW
Viral_helicase1
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AIQ32651
LinkDB
All DBs
Position
complement(7764712..7767588)
Genome browser
AA seq
958 aa
AA seq
DB search
MANESIIIKGARAHNLKNIDVTIPRDRFVVLTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMEKPDVDSIDGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCPDHGIEITSQTVEQMVDRIMQYPEKTRLQILAPVISGRKGEHKGLFTDISKQGFVRVR
VDGELREVTEDIVLEKNKKHTIEVVVDRIVIKDDIETRLTDSLETALKLSGGQILVDVMG
QEELLFSASFACPICGFSIEELAPRMFSFNSPFGACTECDGLGVKMVVDPDLLIPDAEKS
IEEGAFLAWTGSTSNYYPQFLKSVCEHFKIPQNVPVSSLSPEHMTKLLHGTGSEKIRFRY
ENDFGQRKDALVAFEGIIPNLERRYRDTASEGIREFIEGFMSAKPCHVCKGKRLKKEILA
VTINQQNVADVTDLSIGDCLDFFENLKLSEKETAIANLILKEISSRLGFLVNVGLNYLTL
SRAAGSLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNDRLIATLAHMRDLGNT
LIVVEHDEDTMMAADYIIDIGPGAGIHGGQVIAQGTPQEIMDDPNSLTGEYLSGRKFIPV
TSTRRPTDNERWIEIRGAKENNLKNVNVKIPLGVFTAVTGVSGSGKSSLINEILYKSLAR
QLNKAVKVRPGVHKEIRGLENLDKVIEIDQSPIGRTPRSNPATYTGVFDDIRDLFSKTNE
AKVRGFQKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKY
KGKSISDVLEMTVEDATEFFKNIPRIHRKMQTLLDVGLGYINIGQPGTTLSGGEAQRVKL
ASELYRRSTGKTLYILDEPTTGLHVDDIGRLLEVLHRLVDSGESVLVIEHNLDVIKTADY
IIDMGPEGGSGGGTVLATGTPEKLITVEESYTGRYLKPVLIRDTERTQALELQTSDTV
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
ttggcgaacgaaagtataataatcaagggcgcaagggcccataatctcaagaacatcgac
gtaacgattccgcgtgaccgcttcgtcgtgctgacgggactgagcggctcgggtaaatca
tctttggcattcgacacgatttatgccgagggccagcgccgttacgttgaatcgctgtct
gcctatgcccgccagttcctgggtcagatggagaagccggatgtggattccattgacggg
ctatccccggccatatcgattgaccagaaaactacaagccgtaacccgcgttcgaccgta
ggtacggttacagagatttatgactatctgcggctgctgtttgcccgggttgggcatccc
cattgtccggatcatggcatagagattacatcacagactgtggaacagatggttgaccgg
attatgcaatacccggagaagacccgcctgcagattctggcacctgtgatttccggccgt
aagggtgaacataaaggcttgttcaccgatatctccaagcaaggtttcgttcgtgtgcgt
gttgacggtgagcttcgcgaagttacggaagatattgtgctggagaagaataagaagcat
acgattgaagttgttgtcgaccggattgtcattaaggacgatattgagacccgtcttacc
gattcattggagactgcactgaagctgtcgggcggtcagattctggtcgatgtgatgggc
caggaagagcttttattcagcgcaagctttgcctgcccaatctgcgggttcagtatagaa
gagcttgctccgcgtatgttctcgttcaacagcccgtttggtgcctgcacggaatgtgac
gggcttggtgtgaagatggtagtcgatccggatctgctgatcccggatgcggagaagtcc
atcgaagaaggtgcattcttagcctggacaggcagtacgtcgaactactatccgcagttc
ctgaagtcggtatgtgagcatttcaaaattccgcagaatgttcctgtcagcagcctgtca
ccggagcatatgaccaagctgctgcacggaacgggcagtgagaagatccgcttccgttat
gagaacgactttggccagcgcaaggatgcacttgttgcttttgaaggaatcatcccgaat
ctggagcgccgttaccgcgacactgcctctgaaggcatccgtgagtttatcgaaggcttc
atgagcgccaagccatgccatgtctgcaaaggcaaaagactgaagaaagagattctggcc
gtgacgattaatcagcagaatgttgccgatgttacggatctttcgattggagattgtctg
gacttcttcgagaatctcaagctcagtgagaaagaaacggccatcgctaacctgattctt
aaggaaatcagcagccgcttaggattcctcgtaaatgtagggttgaactatctgacgctt
agccgtgcagcgggctcgttatccggcggtgaagcgcagcggatcaggctggctacacag
attggctccagtctgatgggtgtcctgtatattctggatgagccgagcatcgggcttcat
cagcgggataatgaccggctgattgctacgctggctcatatgcgcgatctgggcaatact
ctgatcgtcgttgagcatgatgaggataccatgatggctgccgactatattattgacatt
ggccccggtgccggaatacatggcggacaggtaattgctcaaggtacacctcaggagatt
atggacgatccgaactccctgacaggtgaatacttaagcggacgcaaattcatccctgtc
acctcgacgcgccggcctaccgataatgagcgctggatagagattcgcggggctaaagag
aataatctgaagaatgtaaatgtgaagattccgcttggtgtctttacagcggtcaccgga
gtatccggttccggcaaatcttcacttattaacgaaattctctataagagcctggcacgc
cagcttaacaaggctgtcaaggtccgtcccggtgtgcataaagaaatccgcggtctggag
aatctggataaagtaattgagattgaccagtcaccgatcgggcgtacaccacgttccaat
ccggccacgtatacaggtgtgttcgatgatatccgcgatttgttctccaagaccaatgag
gctaaggtacgcggcttccagaaggggcgcttcagcttcaatgtgaagggcggccgctgt
gaggcttgccggggagacgggattatcaagattgagatgcacttcctgccggatgtgtat
gtgccttgtgaagtctgcaagggcaaacggtataaccgcgaaacgctggaagtgaaatat
aaaggcaagagtatctccgatgtattggagatgaccgtcgaggatgcaacggaattcttc
aagaatatcccgcgtatccaccgcaaaatgcagacgctgcttgatgtgggtctgggctat
atcaacatcggccagccggggacaaccttgtccggtggtgaagcgcagcgcgtgaagctg
gcttccgagctgtaccgccgcagtaccggcaagacgctgtacattctggatgagccgacg
accggcctgcatgtagatgacattggccgtctgcttgaggtgctgcaccgtctggtggat
tccggtgaatcggtcctggtcattgagcataacctcgatgtaatcaagactgctgactat
attattgatatgggtccggaaggcggcagcggcggaggaacggtgcttgcgaccggaaca
ccggagaagctgattactgtcgaggaatcctacacaggccggtatctgaagccggtcctc
atccgcgacaccgaacgtactcaggcgcttgaacttcagacctctgatacggtgtaa
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