KEGG   Pseudomonas aeruginosa PAO581: M801_3465
Entry
M801_3465         CDS       T03171                                 
Symbol
sdiA
Name
(GenBank) regulatory protein SdiA
  KO
K18099  LuxR family transcriptional regulator, quorum-sensing system regulator RhlR
Organism
paeo  Pseudomonas aeruginosa PAO581
Pathway
paeo02024  Quorum sensing
paeo02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:paeo00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    M801_3465 (sdiA)
   02025 Biofilm formation - Pseudomonas aeruginosa
    M801_3465 (sdiA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:paeo03000]
    M801_3465 (sdiA)
Transcription factors [BR:paeo03000]
 Prokaryotic type
  Helix-turn-helix
   LuxR family
    M801_3465 (sdiA)
SSDB
Motif
Pfam: Autoind_bind GerE Sigma70_r4_2 Sigma70_r4 HTH_20 HTH_23 HTH_28 HTH_38
Other DBs
NCBI-ProteinID: AGV60623
LinkDB
Position
complement(3669507..3670232)
AA seq 241 aa
MRNDGGFLLWWDGLRSEMQPIHDSQGVFAVLEKEVRRLGFDYYAYGVRHTIPFTRPKTEV
HGTYPKAWLERYQMQNYGAVDPAILNGLRSSEMVVWSDSLFDQSRMLWNEARDWGLCVGA
TLPIRAPNNLLSVLSVARDQQNISSFEREEIRLRLRCMIELLTQKLTDLEHPMLMSNPVC
LSHREREILQWTADGKSSGEIAIILSISESTVNFHHKNIQKKFDAPNKTLAAAYAAALGL
I
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaggaatgacggaggctttttgctgtggtgggacggtttgcgtagcgagatgcagccg
atccacgacagccagggcgtgttcgccgtcctggaaaaggaagtgcggcgcctgggcttc
gattactacgcctatggcgtgcgccacacgattcccttcacccggccgaagaccgaggtc
catggcacctatcccaaggcctggctggagcgataccagatgcagaactacggggccgtg
gatccggcgatcctcaacggcctgcgctcctcggaaatggtggtctggagcgacagcctg
ttcgaccagagccggatgctctggaacgaggctcgcgattggggcctctgtgtcggcgcg
accttgccgatccgcgcgccgaacaatttgctcagcgtgctttccgtggcgcgcgaccag
cagaacatctccagcttcgagcgcgaggaaatccgcctgcggctgcgttgcatgatcgag
ttgctgacccagaagctgaccgacctggagcatccgatgctgatgtccaacccggtctgc
ctgagccatcgcgaacgcgagatcctgcaatggaccgccgacggcaagagttccggggaa
atcgccatcatcctgagcatctccgagagcacggtgaacttccaccacaagaacatccag
aagaagttcgacgcgccgaacaagacgctggctgccgcctacgccgcggcgctgggtctc
atctga

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