Pseudomonas aeruginosa PAO581: M801_3945
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Entry
M801_3945 CDS
T03171
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
paeo
Pseudomonas aeruginosa PAO581
Pathway
paeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M801_3945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paeo03019
]
M801_3945
Enzymes [BR:
paeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M801_3945
Messenger RNA biogenesis [BR:
paeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M801_3945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGV61598
LinkDB
All DBs
Position
complement(4210182..4211531)
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AA seq
449 aa
AA seq
DB search
MTFASLGLLDPLLKALEGLGHGTPTPIQAQAIPPALKGRDLLAAAQTGTGKTAGFALPLL
QRLTLEGPQVAANSVRALVLVPTRELAEQVHASVRDYGQHLPLRTAVAYGGVSINPQMMK
LRKGVDILVATPGRLLDLYRQNAVKFAQLQALVLDEADRMLDLGFARELDELFAALPRKR
QTLLFSATFSDAIRTLARELLRDPLSIEVSPRNTAAKSVRQWLVPVDKKRKAELFCHLLQ
ANRWRQALVFAKTRKSVEELVGLLQRQGIAADSIHGDKPQPARLRALQRFKAGEVDLLVA
TDVAARGLDIEEMPLVVNFDLPIVAEDYVHRIGRTGRAGASGQAVSLVCADEVELLAAIE
TLIGQTLQRREEPDFEPEHRVPQTAPGGVVLKKPKKPKKPKAAESVGKPGKIHLGSWFDS
SAPTVKAVRKAPGFGAGAAGKPKKRPSGK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgacgttcgcttccctcggtctgctcgaccccctgctcaaggccctcgaagggctcggc
cacggcacgcctacgccgatccaggcccaagccatacccccggcgctcaagggccgcgac
ctgctcgccgcagcacagaccggcaccggcaagaccgccggtttcgccctgccgttgctg
cagcggctgaccctggaggggccgcaggtcgctgcgaactcggtgcgtgcactggtcctg
gtcccgacccgcgaactggccgagcaggtccacgccagcgtccgcgactacggccagcac
ctgccgctgcgtaccgcggtggcctacggtggggtcagcatcaacccgcagatgatgaag
ctgcgcaagggagtggatatcctcgtcgccactcccgggcggctgctcgacctgtatcgg
cagaacgcggtgaagttcgcccagctccaggcgttggtgctggacgaagccgatcgcatg
ctcgacctcggtttcgcccgcgagctggacgaactgttcgccgcgctgccgcgcaagcgc
cagaccctgctgttttccgcgaccttctccgacgccatccgcacgctggcccgtgaactg
ctgcgcgacccgctgtccatcgaggtcagtccgcgcaataccgcggcgaagagcgtcagg
caatggctggtgccggtggacaagaagcgcaaggccgagctgttctgccacctgttgcag
gccaatcgctggcgccaggcgctggtcttcgccaagacccgcaagagcgtcgaggaactg
gtcggactgttgcagcggcagggtatcgccgccgactcgatccatggcgacaagccgcag
ccggcgcggctgcgcgccttgcagcggttcaaggccggcgaggtagacctgctggtagcc
accgacgtggccgcgcgtggcctggatatcgaggaaatgccgctggtggtcaacttcgac
ctgccgatcgtcgccgaggactacgtgcatcgcatcggccgtaccggccgtgccggtgcc
tccggccaggcggtgtcgctggtctgcgccgacgaagtggagctgctggcggcgatcgaa
acactgatcgggcagaccctgcaacgccgcgaggagcccgacttcgagccggagcaccgg
gtgccgcagaccgcaccgggcggcgtggtgctgaagaaaccgaagaagccgaagaaaccc
aaggccgcggagagcgtcggcaagcccggcaagatccacttgggcagttggttcgacagc
agcgcgccgacggtcaaggcggtgcgcaaggcaccgggcttcggcgcgggtgcggcgggc
aagccgaagaagcggccgtccggcaaatag
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