Pseudomonas aeruginosa PAO581: M801_4596
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Entry
M801_4596 CDS
T03171
Name
(GenBank) sigma-54 interaction domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
paeo
Pseudomonas aeruginosa PAO581
Brite
KEGG Orthology (KO) [BR:
paeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paeo03000
]
M801_4596
Transcription factors [BR:
paeo03000
]
Prokaryotic type
Other transcription factors
Others
M801_4596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_22
AAA_16
NACHT
AAA_30
MCM
AAA_7
TniB
ATPase_2
AAA_14
AAA_2
AAA_33
AAA_19
ABC_tran
T2SSE
BrxC_BrxD
ResIII
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AGV61254
LinkDB
All DBs
Position
complement(4908753..4910348)
Genome browser
AA seq
531 aa
AA seq
DB search
MKRTVAIGFIGATLDRLGKGAARWQKWRPSIGLCQQPDLLIDRLELIHGNDARDLGLAER
IRADIAAVSPHTEVRLQQMELRNPWDFEEVYGALHDFVSAYPFDTEREDYLVHITTGTHV
AQICWFLLTEARYLPARLVQTSPSRRKDEARHPEGSATLIDLDLSRYDRIASRFRREQEE
SLALLKSGIATRNAAFNRSIEQIERVAVRSRAPMLLVGPTGAGKSFLARRIYELKRSRHQ
LDGRFVEVNCATLRGDGAMSALFGHVKGAFTGAQNAREGLLRAADGGMLFLDEIGELGAD
EQAMLLKAIEEKRFFPLGSDREVESDFQLIAGTHRDLRGRVAEGLFREDLFARINLWTFE
LPGLAGRREDIEPNIDFELERHAREQGRQVRFNLEAKRRYLAFAGSSEARWAGNFRELSA
SITRMATLADSGRIDEALVEEEILRLRQAWGLDAGREPLADLLGQRVEALDLFDRLQLQA
VLEVCRGAKTLSEAGRRLFAVSRQDKRNPNDADRLRKYLARFGLDWAQIRA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcacggtcgccatcggcttcatcggcgccaccctcgaccgtctcggcaagggc
gcggcgcgctggcaaaagtggcggccgagcatcggcctgtgccagcagccggacctgctg
atcgaccgcctcgaactgatccacggcaacgacgcccgcgacctcggcctggccgagcgg
attcgcgccgacatcgccgcggtgtcgccgcataccgaggtccgcctgcagcagatggaa
ctgcgcaacccctgggacttcgaggaggtctatggcgccctgcacgatttcgtcagcgcc
taccccttcgacaccgagcgcgaggactacctggtgcatatcaccaccgggacccatgtc
gcgcagatctgctggttcctccttaccgaggcgcgctacctgccggcccggctggtgcag
acctcgccgtcgcggcgcaaggacgaggcgcgccatcccgagggctcggcgacgctgatc
gacctcgacctgtcccgctacgaccgcatcgcctcgcggttccgccgcgaacaggaggaa
agcctggctttgctcaagtcgggaatcgccacgcgcaatgccgctttcaaccgctccatc
gagcagatcgagcgggtcgccgtgcgttcgcgggcacccatgctgctggtggggccgacc
ggtgccggcaaatcgttcctcgcccggcgcatctatgaactcaagcgcagccggcaccag
ctcgacgggcgtttcgtcgaggtcaactgcgccaccttgcgcggcgacggcgcgatgtcg
gcactgttcggtcacgtcaagggcgccttcaccggcgcgcagaatgcgcgcgaaggcctg
ctgcgcgcagccgacggtggcatgctgttcctcgacgagatcggcgagctgggcgccgac
gaacaggcgatgctgctcaaggctatcgaagagaagcgcttcttcccgctgggttcggac
cgtgaggtggagagcgacttccagcttatcgccgggacccaccgcgacttgcgcggacga
gtggccgaaggcctgttccgcgaggacctgttcgcccgcatcaacctgtggaccttcgag
ctgccgggcctggctggacgccgcgaggacatcgagccgaacatcgacttcgaactggag
cggcacgcccgcgagcaagggcggcaggtgcgtttcaacctggaggccaagcgtcgctac
ctggccttcgccggttccagcgaagcgcgctgggccggcaacttccgcgagctgtcggct
tccatcacacggatggcgaccctggccgacagcgggcggatcgacgaggcgctggtcgag
gaggagatcctccgcctgcgccaggcctgggggctcgatgcgggccgggagccactggct
gatctgctggggcagcgggtggaggccctggatctgttcgaccgcctgcaactgcaggcg
gtgctggaagtgtgccgcggggctaagaccctttccgaggcgggacgccggctgttcgcc
gtttcgcgccaggacaagcgcaaccccaacgacgccgaccggctgcgcaagtacctggcg
cgtttcggcctggactgggcgcagatacgcgcctga
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