Pseudomonas aeruginosa PA1: PA1S_05025
Help
Entry
PA1S_05025 CDS
T02928
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
paep
Pseudomonas aeruginosa PA1
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paep03019
]
PA1S_05025
Enzymes [BR:
paep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PA1S_05025
Messenger RNA biogenesis [BR:
paep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PA1S_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Helicase_C
DEAD
ResIII
HA2_N
Flavi_DEAD
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHA17804
LinkDB
All DBs
Position
1068447..1070963
Genome browser
AA seq
838 aa
AA seq
DB search
MISLPIDAVVPALRQALGAQHQAVLEAPPGAGKTTRVPLALLDEPWLAGQRILMLEPRRL
AARAAAERLAAELGEKVGETVGYRIRLESRVGPKTRIEVVTEGILARRLQDDPALDGVGL
VIFDEFHERSLDADLALALTLNGRELLRDEPPLKVLVMSATLEGERLAALLGEAPVVRSE
GRMFPVDIRWGRAAQPGEFIEPRVQQAVLQALAEESGSVLVFLPGQAEIRRVHEGLREAL
GGRPEVLLCPLHGELDLAAQRAAIEPASRGTRKVVLATNIAETSLTIDGVRVVIDAGLAR
VPRFDPGSGMTRLETQRISRASATQRAGRAGRLEPGVCYRLWSESQHEQLPAYGTAEILQ
ADLAGLALQLARWGVAPEELAWLDAPPAAAYAQARELLGRLGALNASGALSAHGQAMAEL
PTHPRIAHLLLRGQALGLGELACDVAALLGERDIQRGGGADLHSRLALLAGEARPGASRG
AVQRARQLARQFRGYLRGAASEAVVDPGHPRWLGCLLAFAYPDRIARQRRAGGGDYRLAN
GRAAQFGEPDSLMKLPWLVIADLGSRQGQREERIYLAAELDPRLFDTVLAEQVSQRDELQ
WDEREGVLRAERQRRVGELVLSSEALPGLDEAARSQALLGLVQRKGLELLPWTPELRQWQ
ARIGLLRRLDLEDKGESEWPDVSDAALLERLEEWLPAYLGKVTRLAHFANLDLASILAGL
LPWPLPQRLDEWAPKTLEVPSGSRIRLDYSETPPILAVRLQELFGLGDTPRIAQGRLAVK
LHLLSPAHRPVQVTQDLANFWRSTYAEVRKDLKGRYPKHYWPDDPLVAEATARAKPRK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgatttccctacccatcgacgccgttgttcccgccctgcgccaggcccttggcgcacaa
caccaggccgtcctggaagccccgccgggtgccggcaagaccacccgggtgccgctggcc
ctgctcgacgagccctggctcgccggccaacgcatcctcatgctcgaaccgcgacgcctg
gcggcgcgggccgcggccgagcggctggccgccgagctgggcgaaaaggtcggcgagacc
gtcggctaccggatccgcctggagagcagggtcggcccgaagacccgcatcgaagtggtc
accgagggtatccttgcccgtcgcctgcaagacgacccggcgctggacggtgtcggcctg
gtgatcttcgacgaattccacgagcgcagcctggatgccgacctggccctggcgctgact
ctcaatggccgcgaactgttgcgcgacgagccgccgctgaaagtgctggtgatgtcggcg
accctggagggcgagcgtcttgcggcgctgctcggcgaagcgccggtggtgcgcagcgag
ggccgcatgttcccggtggatatccgctggggacgggcggcgcaacccggcgagttcatc
gagccgcgggtgcagcaggcggtgctccaggcgctggcggaggaaagcggcagcgtgctg
gtctttcttcccggccaggccgagatccgccgcgttcacgaaggcttgcgcgaggccctt
ggcggtcgccccgaggtgctgctctgcccgctgcatggcgagctcgacctcgccgcccag
cgcgccgccatcgagccggcgtcgcggggcacgcgcaaggtggtgctggcgaccaacatc
gccgagaccagcctgaccatcgacggcgtacgggtggtgatcgacgccggcctggcgcgg
gtgccgcgcttcgatccgggtagcggcatgacccgcctggagacccagcgcatctcccgc
gcctccgctacccagcgtgccggccgcgcagggcgcctggagccgggcgtatgctaccgc
ttgtggtcggagagccagcatgagcagttgcctgcctacggcacggcggaaatcctccag
gccgatctggccgggctggccctgcaactggcgcgctggggcgtggcgccggaggagctg
gcctggctcgacgcgccgcccgcggcggcctacgcccaggcccgcgagctgctcgggcgg
ctgggggcgctgaacgccagcggcgcgttgagtgcccatggccaggcgatggccgaattg
ccgacccatccgcgcattgcccacctgctgctgcgcggccaggccctcggccttggcgaa
ctggcttgcgacgtagcggcgctgctcggcgaacgtgacatacagcgtggcggcggcgcc
gacctgcacagccgtctcgccctgctcgccggcgaggcccgccctggcgcctcgcgcggc
gcggtacagcgcgcccggcaactggcccggcagttccgcggttacctgcgcggcgccgcc
agcgaggcggtcgtcgatcccggtcatccgcgttggctgggttgcctgctggccttcgcc
tatcccgaccgcatcgctcgccagcgccgcgccggcggcggcgactaccggctggccaat
ggacgcgctgcgcagttcggcgaaccggacagcctgatgaagctgccctggctggtgatc
gccgatctgggcagccgccagggccagcgcgaagagcggatctacctggccgccgaactc
gatccgaggttgttcgatacggtcctggcggagcaggtcagccagcgcgacgagctgcag
tgggacgagcgcgaaggcgtgctgcgcgccgagcgccagcgccgggtcggcgaactggtg
ctgtccagcgaggcgctacccggcctcgacgaagcggcgcgcagccaggcgctgctcggc
ctggtccagcgcaagggcctggagttgttgccctggaccccggaactgcgccagtggcag
gcgcgcatcggcttgctgcgccggctggacctggaagacaagggcgagagcgagtggccg
gacgtcagcgacgccgcgttgctggaacggttggaggaatggttgccggcctatctcggc
aaggtcacccgcctggctcacttcgccaacctcgacctggcttcgatcctcgccgggctg
ttgccctggccattaccgcagcgtctcgacgagtgggcaccgaaaaccctggaagtcccc
tccggctcgcgcatccgcctggactacagcgaaaccccgccgatcctcgcggtgcgcctg
caggaactgttcggcctcggcgacactccgcgcatcgcccagggccgcctggcagtgaag
ctgcacctgctgtctcccgcgcatcgcccggtgcaggtgacccaggacctggcgaacttc
tggcgcagcacctatgcggaagtcaggaaggacctgaagggacgctatccgaagcattat
tggccggacgacccgctggtggccgaggccactgcccgggccaagccacgcaagtaa
DBGET
integrated database retrieval system
