Pseudomonas aeruginosa PA1: PA1S_07210
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Entry
PA1S_07210 CDS
T02928
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
paep
Pseudomonas aeruginosa PA1
Pathway
paep03030
DNA replication
paep03430
Mismatch repair
paep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PA1S_07210
03430 Mismatch repair
PA1S_07210
03440 Homologous recombination
PA1S_07210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paep03032
]
PA1S_07210
03400 DNA repair and recombination proteins [BR:
paep03400
]
PA1S_07210
Enzymes [BR:
paep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PA1S_07210
DNA replication proteins [BR:
paep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PA1S_07210
DNA repair and recombination proteins [BR:
paep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PA1S_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AHA17411
LinkDB
All DBs
Position
1512643..1516164
Genome browser
AA seq
1173 aa
AA seq
DB search
MTVSFVHLRLHTEFSLVDGLVRVKPLAKAVAGLGMPAVAVTDQSNMCSLVKFYKTAMGAG
IKPICGADIWLASREEDGPLSRLSLLAMNAKGYRNLTELISRGWSEGQRNGEIIIERDWV
KEAAEGLIALSAAKEGEIGHALLDGEEAKAEALLREWMEVFPERFYVEVQRTSRVNDEEH
LHAAVALASRCNAPLVATNDVRFIKQDDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
SPAEMAELFSDLPEALENTVEIAKRCNIEVQLGKYFLPDFPTPNGMGIDDYLRHASFEGL
EERLEVLLPKDTPDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMEGRDRVIDYVA
DAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQEE
MLRDFLKSDEEAAEIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLVT
QFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKGLEPVNIDFIPLDDKPTYSL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
ELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCKNNGIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHFP
APFMAAVLTADMQNTDKVVTLIEECRHMKLRIVAPDVNNSEFRFTVDDDGRIVYGLGAIK
GVGEGPVEAITECRAEGGPFNTLFDFCDRVDLKRINKRTLEALIRAGALDRLGPHYHDEL
KAYQATVDLNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGVFAEPEADVYANHRKVKE
LTLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTVAGLIVNLRVM
KNKKGDKMGFVTLDDRSGRIEASLFSEAFAAAQSLLQTDALVVVEGEVSQDDFSGGLRLR
AKRVMSLEEARTGLAESLRMKLHADLLKGDRLRWLGELFNRHRGSCPITLDYTSADAKAL
LQFGESWRVDPADDLIQALRDQFGRDNVFLNYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtatccttcgttcacctgcgtctgcataccgaattctccctggtcgacggcctg
gtccgggtcaagcccctggccaaggcagtggcagggctgggcatgccggcggtggcggtc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggggccgacatctggctcgccagccgcgaggaagatggcccgctc
agccgcctgagcctgctggcgatgaacgcgaagggctatcgcaacctcaccgagctgatt
tcccgcggctggagcgaaggccagcgcaatggcgagatcatcatcgagcgcgactgggtc
aaggaggcggcggaaggcctgatcgcgctgtccgcggccaaggaaggcgagatcggccac
gcgctgctcgacggcgaggaggccaaggccgaggcgctgttgcgcgagtggatggaggtg
ttccccgagcgcttctacgtcgaagtgcaacgtaccagccgggtcaacgacgaggagcac
ctccacgcggcggtggctctggcgtcacgctgcaacgcgccgctggtggcgaccaacgac
gtgcgcttcatcaagcaggacgacttcgaggcccacgagacccgcgtctgcatcggcgag
gggcggaccctcgacgatccgcggcggccgcgtacctattcggaccagcaatacctgaag
tcgccggcggaaatggccgagctgttcagcgacctgccggaagcgttggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaggtgcagctgggcaagtacttcctgccggacttc
cccacgcccaatggcatgggcatcgacgactacctgcggcacgcctccttcgaaggtctc
gaggagcgcctggaggtgctgttgccgaaggataccccggactacgaggccaagcgccag
gtctatgtcgaccgtctgaacttcgaactcgatatcatcatccagatgggtttccccggt
tacttcctcatcgtgatggacttcatcaagtgggcgaagaacaacggcgtgccggtaggc
cccgggcggggctcgggcgccggctcgctggtggcctacgtgctgaagatcaccgacctc
gatccgctggcctacgacctgctgttcgaacgtttcctcaacccggaacggatctccatg
cccgacttcgacgtcgacttctgcatggagggccgcgaccgggtgatcgactacgtggcc
gacgcctacgggcgcaacgcggtgagccagatcatcaccttcggcaccatggcggcgaag
gcggtggtacgcgacgtggctcgggtccagggcaagtcctacggtctcgccgaccggctg
tcgaagatgatcccgttcgaagtcggcatgaccctggataaggcctacgagcaggaagaa
atgctccgcgacttcctcaagagcgacgaggaagccgccgagatctgggagatggccctc
aagctggaaggcatcacccgcggtaccggcaagcacgccggtggcgtggtgatcgcgccg
accaagctgaccgacttctcgccgatcgcctgcgacgaggaaggcggcggcctggtgacc
cagttcgacaaggacgacgtggaggcggccggcctggtgaagttcgacttcctcggcctg
cggaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaagaag
ggcctggagccggtgaacatcgacttcatcccgctggacgacaagccgacctattcgctg
ctgcagaaggccgagaccactgcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctcaagccggactgcctggaagacctcatcgcactggtggcgctgttccgc
ccgggtcctctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggtcgcgcc
gagctgtcctatccgcaccccgattaccagtacgccggcctggagccggtgctcaagccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtcatggccggc
tataccctcggtggcgcggacatgctgcgccgggcgatgggcaagaagaagcccgaggaa
atggccaagcagcgcggcggtttcatcgagggttgcaagaacaacggcatcgatgccgac
ctcgcgggcaacatcttcgacctggtggaaaaattcgccggctacggcttcaacaagtcg
cactcggcagcctacggcctggtctcctaccagaccgcctggctgaagacccacttcccg
gcgccgttcatggccgcggtactcaccgcggatatgcagaacaccgacaaggtggtgacg
ctgatcgaagaatgccggcacatgaagctgcgcatcgtggcgccggacgtgaacaactcc
gagttccgcttcaccgtcgacgacgatggccggatcgtctatggcctgggcgcgatcaag
ggcgtcggcgaggggccggtggaggcgatcaccgaatgccgcgccgaaggcgggccgttc
aacaccctgttcgacttctgcgaccgcgtcgacctgaaacgcatcaacaagcgcaccctg
gaagcgctgatccgcgccggtgcgctggatcgcctggggccgcactaccacgacgagcta
aaggcctaccaggctaccgtcgacctcaaccgcgccgtgctgctggcggcgatggaggaa
gcgatccaggccgccgagcagaccgcgcgcagccacgacagcgggcacatggacctgttc
ggcggagtcttcgccgagccggaggcggatgtctacgccaaccaccgcaaggtcaaggag
ctgaccctcaaggaacgcctgaagggcgagaaggacaccctcggcctgtacctgaccggc
catccgatcgacgagtacgaaggcgaggtgcggcgcttcgcccgccagcgcatcgtcgag
ctgaagccggcgcgcgatacccagacggtggccgggctgatcgtcaacctgcgggtgatg
aagaacaagaagggcgacaagatgggcttcgtcaccctcgacgaccgctccggacggatc
gaggcctcgctgttctccgaagccttcgccgcggcccagtcgctgctgcagaccgacgcg
ctggtggtggtcgagggcgaggtcagccaggacgacttctccggcggactgcgcctgcgc
gccaagcgcgtgatgagcctggaggaggcgcgtaccggcctggcggagagcctgcggatg
aagctgcacgccgacctgttgaagggcgatcgcctgcgctggctgggcgagctgttcaac
cgccatcgcggttcctgcccgatcaccctggactacaccagcgccgacgccaaggccctg
ctgcagttcggcgagagctggcgggtggatccggcggacgatctgatccaggcattgcgt
gaccagttcgggcgcgacaacgtcttcctcaattatcgttaa
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