Pseudomonas aeruginosa PA1: PA1S_11105
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Entry
PA1S_11105 CDS
T02928
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
paep
Pseudomonas aeruginosa PA1
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paep03016
]
PA1S_11105
Enzymes [BR:
paep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PA1S_11105
Transfer RNA biogenesis [BR:
paep03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PA1S_11105
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHA16662
LinkDB
All DBs
Position
complement(2355237..2355785)
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AA seq
182 aa
AA seq
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MPDRFLRLFFALPCPPPLAERIGRWRDDRPLPGRQVATANLHLTLAFLGQVPSARLEALL
DMAAAIEAAPFDLYLDRLLRWRNGILLLAPSQPPGALLRLRRALRSGLAELELPVETRSF
SAHLTLARDAAPLEDAPPPPTFVWQVDHFSLFCSQNDAAGVRYRTLGRWALCGEDSNERF
AP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcgctttcttcgcctgttcttcgccctgccctgcccacctcccctcgccgag
cggatcggccggtggcgcgatgaccggccactgcccggacgccaggtggcgacggcgaac
ctgcacctgaccctggccttcctcgggcaggtcccgtccgctcggctcgaggccctgctg
gacatggccgcggccatcgaggccgcgcccttcgacctgtatctcgaccgcctgctgcgc
tggagaaacggcatcctgctgctggcccccagccaaccgcccggcgccctcctgcgcctg
cgccgcgccctgcgctccggccttgccgaactggagctgcccgtggaaacccgctcattc
agcgcccatctgaccctggctcgcgatgccgcgccgctggaggacgccccgccaccccca
accttcgtatggcaggtcgaccatttcagcctgttttgctcgcaaaacgacgcagcgggc
gtgcgctaccgcacactcggtcgctgggcgttgtgcggggaagattcaaacgagcgtttc
gcgccgtaa
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