Pseudomonas aeruginosa PA1: PA1S_21140
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Entry
PA1S_21140 CDS
T02928
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
paep
Pseudomonas aeruginosa PA1
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paep03032
]
PA1S_21140
03400 DNA repair and recombination proteins [BR:
paep03400
]
PA1S_21140
Enzymes [BR:
paep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PA1S_21140
DNA replication proteins [BR:
paep03032
]
Prokaryotic type
DNA Topoisomerases
PA1S_21140
DNA repair and recombination proteins [BR:
paep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PA1S_21140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AHA20477
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All DBs
Position
4533446..4535365
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AA seq
639 aa
AA seq
DB search
MHLVIIEAPGKLKKLRSLLPSIRPDVTWQVEATAGHIRDLPVHGQDPQMLTVGVGQDFKP
HYQILSGKENTVARLKELRQKAVEIYVASDPDREGESIGWHILQAAGIKNYKRVAFKEIT
KSCISAELSSPRRLDLPKVASQECRRVIDRLVGYLVTPELRRVMGRPTTAGRVQSVAVYL
VVLREREIRAFTAIKHFGVELAFVSPSDGRTWKAEWDPVPTFASKEFPYVQDRQLAELVG
AIRNVIVETCIDGEETDAPPAPFISSSLQMAAGNALKWSPDKTMKVAQGLYEQGLITYHR
TDNPNISKDSMPDIRAVAKALGLKCVEQQRMFKADQDAQEGHPAITPTDWMAASAGETAD
EQALYQLIRVRALASQIEAAVYAVRTITLLGVGPDKKPLRLGAKEKLLNVPGWRKLLQGD
DAEEQKNETPSNPIPALEPGQILKVYSGEVLEKKTTPPKRFTDASLVGEMKRRGIGRPSS
YASIVKNIIDKGQVQMKGRSLIPGELGEATIALLEHNFSFLSLDFTRNLEVALDRIANSE
DTYMNVVQQFYQLLQTELQTLRALPSAQDEPRASSTAKVSSAPSSDFLCGKCGLPLVHRK
KAGKGGFDFWGCSGYRSTGCKVSYPTKDGQPDFDKPRGL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcgtaatcattgaagccccgggcaagctgaaaaagctgaggtcccttctccct
tcgattcgtcccgacgtgacctggcaggtcgaagcgactgccggtcatatcagagaccta
cccgttcacggccaggatccgcagatgctcaccgtcggcgtgggccaggatttcaaaccg
cactaccagatcctctcgggcaaggaaaacaccgtcgcacggctgaaggagctgcggcag
aaagccgtggaaatctacgtcgcatcggacccggatcgcgaaggcgaaagcatcggctgg
cacatcctccaggctgccgggatcaagaactacaagcgcgttgccttcaaggaaatcacc
aagtcgtgcatcagcgccgaactcagctcgccgcgtcgcctggacctcccgaaggtcgcc
tcgcaggaatgccgtcgcgtcatcgatcgcctggtggggtatctggtcacgccagagctg
cggcgcgtgatgggcaggccaaccaccgccgggcgcgtgcagtccgtcgcggtgtacctg
gtggtcctgcgagagcgagagattcgcgccttcacagcaatcaagcacttcggggtggaa
ctggccttcgtttcgcccagcgacggccgcacctggaaggcggagtgggatccagtgccc
acgtttgccagcaaggagttcccgtatgtccaggatcgtcaactcgcagaactggtgggg
gctatacgtaatgtcatcgtcgagacctgcattgatggcgaagaaaccgatgcgcctccg
gcaccgttcatctcctcctcgctccagatggccgccgggaatgcgctgaagtggtcaccc
gacaagacgatgaaggtcgcccaggggctgtatgaacaggggctcatcacctaccaccgg
acggacaaccccaatatctcgaaggactcaatgccggatatccgtgctgtcgccaaagcc
ttggggctgaagtgtgttgagcaacagcggatgttcaaagcggaccaagacgcccaggaa
ggccaccccgccatcacccctaccgactggatggccgcttccgccggtgaaactgctgat
gagcaggcgctgtaccagctcattcgagtccgcgcgcttgccagccagatcgaagctgcc
gtgtacgcagtgagaaccatcaccctcctgggcgtcggccccgacaaaaagccgctgcgc
ttaggagccaaagagaagctgttgaacgtgcctggctggagaaaactgctgcagggtgat
gacgccgaggagcagaagaacgaaacgccttcaaaccccatcccggcgctggagccaggc
cagatactcaaggtctacagcggcgaagtcctggagaagaaaaccacccctcccaagcga
ttcaccgacgccagcctggtgggcgagatgaagcgccgcgggattggtcggccatcctcc
tacgcctcgatcgtgaagaacatcatcgacaaaggccaggtgcagatgaaggggcgaagc
ctgatccccggcgagctgggagaggccaccatcgcgctcctggagcacaacttcagcttc
ctcagcctcgacttcacccgcaacctcgaggtcgccttggaccggatcgccaacagcgag
gacacctacatgaacgtggtccagcagttctaccagctactacagactgagctgcagaca
ctccgcgcgctccccagcgcccaggacgaaccacgcgcaagctccaccgccaaggtctcc
tcggcaccttccagcgacttcctttgcggcaagtgcggtctgcccctggtccaccgcaag
aaagccggcaagggcggcttcgacttctggggttgcagcggctaccgcagcaccggctgc
aaggtcagctaccccaccaaggacggccaacctgacttcgacaaaccgcgcgggctatag
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