Pseudomonas aeruginosa PA1: PA1S_28540
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Entry
PA1S_28540 CDS
T02928
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
paep
Pseudomonas aeruginosa PA1
Pathway
paep00300
Lysine biosynthesis
paep00470
D-Amino acid metabolism
paep01100
Metabolic pathways
paep01110
Biosynthesis of secondary metabolites
paep01120
Microbial metabolism in diverse environments
paep01230
Biosynthesis of amino acids
Module
paep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
paep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PA1S_28540
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PA1S_28540
Enzymes [BR:
paep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PA1S_28540
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AHA19136
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Position
6167857..6169104
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AA seq
415 aa
AA seq
DB search
MDTFSYRDGELFAEGVALSRIAERFGTPTYVYSRAHIEAQYRAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGDPAKVVFSGVGKTRDDMRRALEVGVH
CFNVESGEELERLQRVAAELGVKAPVSLRVNPDVDAQTHPYISTGLKENKFGIAIDEAEA
VYARAAELDHLEVIGVDCHIGSQLTQLEPFLDALERLLGLVDRLAGKGIGIRHLDLGGGL
GVRYRDEQPPLAGDYIRAIRERLHGRDLTLVFEPGRSIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVQAVRPRDAAPRRYDLVGPICETGDFLAKDRDLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQTHEVRRRETVQELYAGESLLPQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacacattcagttaccgcgacggtgagctgttcgcggaaggggtggcgctttcccgc
atcgccgagcgtttcggcacgcccacctacgtctattcccgcgcacacatcgaggcccag
taccgcgcctatgccgatgccctcgccggcatgccgcatctggtctgcttcgcggtcaag
gccaactccaacctcggggtgctgaatgtgctggcgcgcctcggcgccggtttcgacatc
gtttcccgcggtgagctggagcgtgtcctggccgccggcggcgatccggccaaggtggtg
ttctccggcgtcggcaagacccgcgacgacatgcgccgcgccctggaagtcggcgtgcac
tgcttcaacgtcgagtccggcgaagagctggagcgcctgcaacgggtagctgcggaactc
ggcgtgaaagcgccggtatcgctgcgggtcaacccggacgtggacgcccagacccacccc
tatatctccaccggcctgaaagagaacaagttcggcatcgccatcgacgaggccgaggcg
gtctacgcccgcgccgccgagcttgaccacctggaggtgatcggcgtcgactgccacatc
ggctcgcaattgacccagctggagcccttcctcgacgccctcgagcgcctgctcgggctg
gtcgaccgcctggccggcaaaggcatcggcattcgccacctggacctcggtggtggcctc
ggggtgcgctaccgcgacgaacagccgccgctggccggcgactacatccgcgccatccgc
gagcgcctgcacggccgcgacctgaccctggtgttcgagccgggccggtccatcgtcgcc
aacgccggcgtgctgctgacccgtgtcgagtacctcaagcacaccgagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggctctctaccaggcctggatg
gacgtgcaggcggtacgcccgcgcgacgccgcgccgcgccgctacgacctggtcgggccg
atctgcgagaccggtgacttcctcgccaaggatcgcgacctggcgctcgccgaaggcgac
ctcctggcggtgcgctcggccggcgcctacggcttcgtcatgagctcgaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggcgagcagacccacgaggtccgtcgccgc
gagaccgtccaagagctctacgccggcgaaagcctgctgccgcagtga
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