Paenibacillus sp. FSL R5-0912: R50912_00025
Help
Entry
R50912_00025 CDS
T03334
Name
(GenBank) recombinase RecF
KO
K03629
DNA replication and repair protein RecF
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
R50912_00025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_00025
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
R50912_00025
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIQ38627
LinkDB
All DBs
Position
3071..4189
Genome browser
AA seq
372 aa
AA seq
DB search
MFVKNIGLQYYRNYGLLRLTSLGDVNLILGQNAQGKTNLMEALFVLAMTKSHRTSKDKEL
ISFDAPAGSAQIVAEVERKYGDLKLELTLSPQGKKARINGLEQRRLSEFVGSLNVVMFAP
EDLEIVKGTPGIRRRFLDMEIGQVQPSYLFHLQQYQKVLLQRGNLLKQLWGKEAAGKELL
EIWDAQLIEHGVKIVKKRKQFIKKLQIWAESIHRGITNGGEELKLLYVPSFGEREEEDEA
VLLDKFMLKLSQTRDQEIRRGMTLTGPHRDDLSFFINGREAQVYGSQGQQRTAALSLKLA
EIELIHEEIGEYPVLLLDDVLSELDPYRQTQLIETFQSKVQTFITATGVEGLNADKLKGA
SLYHVHGGTVEL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgtcaaaaatatcggtctgcagtattaccgcaactatgggctgctgcgccttacg
agcctgggcgatgtaaacctcattctcggtcagaacgcccaaggcaaaacaaatctcatg
gaggctttgttcgtcctggcgatgaccaaaagccaccgtacctccaaggacaaggaactc
atatccttcgatgctcctgcaggttccgcacagattgtggccgaagtggagcgcaaatac
ggtgatcttaagctggagcttaccctgtcaccccaaggcaaaaaagccagaattaacgga
ctggagcagcgccggcttagtgaattcgtaggttcactgaatgtggtgatgtttgctccg
gaggatctcgagattgtcaaaggcaccccgggcatcaggcgccggttccttgacatggag
attggacaggtccagcccagctacctgtttcatctgcagcaataccagaaggtgctgctc
caaagagggaatctgctgaagcagctatggggaaaagaagctgccggcaaggagcttctg
gagatatgggatgcgcaacttatagagcatggtgttaaaatcgtcaaaaaaaggaaacaa
ttcataaagaagctgcagatatgggcagaaagcatccatcgcggcattacaaacggcgga
gaagagctcaaactgctctatgtcccctctttcggtgagcgcgaagaggaagatgaagct
gtcttattggacaaatttatgttaaagttatcacaaacaagagatcaggaaatcaggcgc
ggcatgacgctgacgggtccccatagggatgacctgtccttttttatcaacggaagagaa
gctcaggtctacggttcccagggacagcaacgtacggcagctttatcgctcaagctggcg
gaaattgaactgatccatgaggagatcggagagtatcctgtgctgcttcttgatgatgtt
ttgtccgaacttgatccctatcgtcagacccagcttatcgaaacatttcaaagcaaggta
cagaccttcatcaccgccaccggtgtagagggactgaatgccgataaattaaaaggcgcg
agcctgtatcatgtgcacggcggcacagtggagctataa
DBGET
integrated database retrieval system