Paenibacillus sp. FSL R5-0912: R50912_06375
Help
Entry
R50912_06375 CDS
T03334
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R50912_06375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_06375
Enzymes [BR:
paeq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
R50912_06375
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
R50912_06375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AIQ39698
LinkDB
All DBs
Position
1413647..1414774
Genome browser
AA seq
375 aa
AA seq
DB search
MLKIGSHVSCADKGLLSAANEANEYGSTSFMIYTGAPQNTRRKPIESMFPEEGKLAMAQN
GVEEIVVHAPYIINLGSYKESTYQLAVDFLQEEIRRTHALAVKHIVLHPGAFTDKDAEYG
IQRIADGLNEVLGGTNETEVHIALETMAGKGTEVGRSFEEIASIIDKVVHNERLSICLDT
CHIHDAGYDIVGDLDGVLKKFDDTIGLGRLGVIHINDSKNPRGAGKDRHTPIGSGYIGFE
TINNVVHHEALAGLPFILETPWIGKDAKKLRPMYEVEIALLRGNVAERFGAEFLQELEEL
HAFFAKQELDSRRYVLDVWELLKNDAKAKKADPREPLERLYDQVIAAGLFPQLSEEAVNQ
RLIAWLAGKQLLVNA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaataggttcacatgtgtcctgcgcggacaagggtctcctgagcgcggccaat
gaagcaaatgagtacggatctacctcgtttatgatatatacgggagcgccgcagaatacg
cgccgtaagccaattgaatcgatgttccctgaggaggggaagctggctatggcgcagaat
ggcgtcgaagagattgtggttcacgccccatacattattaacctgggctcctacaaggaa
agcacctaccagctggcagttgatttcctgcaggaggagatccgccgtacccatgcgctt
gccgttaagcatattgtcctgcatccgggtgcatttaccgataaggatgccgaatatggc
attcagcgtattgcagacggactaaatgaggtccttggcggtacgaatgagacggaagtg
catattgctctggaaacaatggccggcaagggaacagaggtcggacgcagcttcgaggag
attgcttccattatcgataaggtcgtacataatgagcggttgtccatttgtctcgacacc
tgtcacattcatgatgccggatacgatatcgtgggcgatctggatggcgtgctgaagaaa
ttcgatgataccatcggcctgggacggctcggcgttatccacattaatgacagcaagaat
ccgcggggagcgggcaaagaccgtcatactccgatcggctcgggctatattggttttgag
acgatcaacaatgtcgtacatcatgaagcactggcgggtctgccgttcattctggagacc
ccgtggataggcaaggatgccaagaagcttcgtccaatgtatgaagtggaaattgctctg
ctgcgcggcaatgtggctgaacgtttcggagcagaattcctgcaggagctggaagagctg
catgctttttttgccaaacaggagctggactcccgccgctatgtgcttgatgtatgggaa
ttgctgaagaatgatgccaaagcgaagaaagccgatccccgtgagccgctggaacgtctc
tatgatcaagtaattgccgccggattattccctcagcttagtgaggaagccgtcaaccag
cggctgatcgcctggctggcaggcaagcagctgctcgtgaacgcttaa
DBGET
integrated database retrieval system
