Paenibacillus sp. FSL R5-0912: R50912_11070
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Entry
R50912_11070 CDS
T03334
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03030
DNA replication
paeq03410
Base excision repair
paeq03420
Nucleotide excision repair
paeq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R50912_11070
03410 Base excision repair
R50912_11070
03420 Nucleotide excision repair
R50912_11070
03440 Homologous recombination
R50912_11070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paeq03032
]
R50912_11070
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_11070
Enzymes [BR:
paeq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R50912_11070
DNA replication proteins [BR:
paeq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
R50912_11070
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
R50912_11070
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50912_11070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
DNA_pol_A_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIQ40504
LinkDB
All DBs
Position
2539037..2541709
Genome browser
AA seq
890 aa
AA seq
DB search
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPSHMIVAFDAG
KITFRHEGYEDYKGGRQKTPPELSEQFPLLKELLQGLGVPQFEIGGYEADDIIGTISREA
DAAGRQVMIVSGDKDMLQLASEHTTVALVRKGVTEVELYGPQQIRDKYDLTPEQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLQQFGSVEGVLAGTGELKGKMKEKLEEHADSAIMSKK
LATIYREVPLAHAWEDMVFSGINTDTAGPALAKLEFKSLLERLSLSAYSHTADGSSSDPA
AVEAATLNITIVDEAGLADLITALPGISALHVESNGENPHRAEVIGLGLSSPEQHYFVPF
ALLKSAAAAPLRHWLGDDKAPKSGYDLHRADLALHWQGIAFAGAANDVQLAAYLLDPTEA
NQNLNDLTSKYGLPRLSPDEDVFGKGAKYRIPELEILGNHVARKSATVLGIVQKQQEELE
ETAMTGLFQDLEMPLSRILADMEKQGIAVNKDDLIELGKEFEAQISRLVGEIYSICGTEF
NLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDAVRLILQYRSIAKLQST
YVEGLLKEISPETRKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPG
WSILAADYSQIELRVLAHISGDERMKEAFVEDMDIHTKTAMDVFGVTADMVDSNMRRSAK
AVNFGIVYGISDYGLSQNLNIPRKEAAQFIEQYFEVFKGVRRYMDDIVVEARKQGYVTTL
LERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLKSRMLL
QVHDELVFEVPEDELEQMKLLLPEVMAGALKLSVPLKAEVSFGSNWYEAK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
gtggacaagctgatactgattgatggaaataatatcatttaccgggcgtttttcgcgatg
ccgccgctgacgaatacagcaggacagcaaacgaatgcggtgtacggtttcacgacaatg
cttctgcgtttgattgaagagcataagccgagtcatatgattgtggcctttgacgccggt
aagattaccttccggcatgaagggtatgaagactataaaggcggacgccaaaagactccg
ccggaattgtctgaacagttcccgcttctgaaggaactgctgcagggattaggggtgccg
cagtttgagatcggcggctatgaagccgacgatattatcggcaccatctcccgcgaggcg
gatgccgcagggcggcaggtgatgattgtgtccggggataaggacatgctacagctggcg
tccgagcatacaaccgtcgcgctggtccgtaagggcgttacggaagtagagttgtacggg
ccgcagcagatccgggacaaatatgatcttaccccggagcagatcatcgatctgaaaggg
ctgatgggcgatgccagtgacaatattcccggtgtgccgggagtaggggagaagacagcg
cttaagctgcttcagcagttcggatcggtggaaggtgtactggccggaaccggtgagctg
aagggcaagatgaaggaaaagctggaggagcatgctgacagcgccatcatgagcaagaaa
ctggcgacgatctaccgcgaagttccgctggcgcatgcctgggaggatatggtcttcagc
ggtattaatacggatacggctggccctgcactcgctaagctcgaattcaaatccctgctc
gaacgcctgtcgctgagcgcctattcccatacggccgatggcagcagttccgatccagca
gcggtggaagcggcaacgcttaatatcactattgtggatgaagccggactggcggacctg
attactgcgctgccgggcatttcggcgctgcatgtggagtcgaatggtgagaatccgcac
cgtgcggaggtcattggtctcgggctgtcttcgccggagcagcactacttcgtgccgttt
gcactgctgaagagtgccgcagcggcgccgctgcggcactggctcggcgatgacaaagcg
ccgaagagcgggtatgacctgcaccgtgccgatctggcgctgcattggcaggggattgct
tttgccggagctgctaatgatgtccagcttgccgcatatctgctcgatccgacggaagcg
aaccagaatctgaatgatctcacgagcaaatacggtctgccccgcttatcaccggatgaa
gatgtattcggcaaaggggccaaatatagaatacctgagcttgagattctcggaaaccac
gtagcccgcaagagcgcaactgtgcttggcatcgtgcagaagcagcaggaggagctggaa
gagaccgcgatgaccggactgtttcaggatctggaaatgccgctctcgcggattcttgcc
gatatggagaagcagggcattgcggttaacaaagatgacctcatagagctcggcaaagaa
ttcgaagcacagatctccaggctggttggagaaatctattcgatctgcggaaccgaattc
aatctcaattcaccgaagcagctgggggaaatcctgtttgtgaagctcggcctgcctgtc
gtgaagaagacgaagaccgggtattccaccgatgccgaagtgctggagaagctggctcct
taccatgacgctgtgcgcctgatcctgcaataccgttccattgccaagctgcaatccacc
tatgtggaaggcctgctgaaggaaatctcgccggagaccaggaaggtacacaccttctac
cggcagacgattgccgctacgggacggctcagcagccagttcccgaacctgcagaatatt
ccgatccggctggaagaaggccgcaagatccgtaaggtgttcgtgccttccgaacccggc
tggtcgattctggcggcggattactcgcagattgagctgcgggtgttggcacatatctcc
ggcgatgagcggatgaaggaagcttttgtagaagacatggatattcacacgaagaccgcg
atggacgtatttggcgttactgccgatatggtggacagcaatatgcgccgttcagccaaa
gcggttaacttcggaattgtgtatggcatcagcgattatggcctgtcacagaacctgaac
attccgcgcaaggaagcggcccagttcattgagcaatatttcgaagtgttcaagggtgtc
cgccgctatatggatgatatcgtcgtagaggcccgtaagcaggggtatgtgaccaccttg
ctggagcgccgccgctacctgccggagattaacgcgaagaacttcaacttgcgttccttc
gccgaacgtaccgccatgaatacaccgatccaggggacggctgccgatattatcaagctg
gcgatggttcacatggacaaggcgctatacgagcgcgggctgaagagccgtatgctgctg
caggtacacgatgagcttgtattcgaggtgccggaagatgaactggagcagatgaagctg
ttgctgccggaggttatggccggagcgctgaagctgtccgttccattgaaggcagaggta
agttttggaagtaactggtatgaagcgaaatag
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