Paenibacillus sp. FSL R5-0912: R50912_13575
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Entry
R50912_13575 CDS
T03334
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03420
Nucleotide excision repair
paeq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50912_13575
03430 Mismatch repair
R50912_13575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_13575
Enzymes [BR:
paeq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50912_13575
DNA repair and recombination proteins [BR:
paeq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50912_13575
MMR (mismatch excision repair)
Other MMR factors
R50912_13575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
DEAD
AAA_30
NACHT
nSTAND3
AAA_16
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIQ40940
UniProt:
A0A089JZP9
LinkDB
All DBs
Position
3144571..3146991
Genome browser
AA seq
806 aa
AA seq
DB search
MEKISSWEQEQEWLEQVKEKLKLGIANLEPEVGRLKEQATDIRKRFWEEVTVNTSTQEDF
EESFFTITQQDAVLSERERSHARKLQQWKNMKRLLPSPYFGRIDFHEDGQSAEEQVYVGV
SSFVDTDGLSFVVYDWRTPIASLYYDYPPGKAAFDTPGGRISGTMSLKRQYQIRNGQLQH
LFDANVTIGDELLQQVLGKGADAQMKSIVATIQAEQNAIIRNDNSQMLIVQGAAGSGKTS
AALQRVAYLLYKHRERLSADQIVLFSPNPMFNSYVSTVLPELGEENMQQTTFQEYLETWL
SPEFRLEDPFDQIEYVLTGEQDRGYGSRLQAIEYKASEAFLRALQGYSLWLKQEGMRFND
ICFGDRVLISGEQIKTRLYSYDPSIRLPNRVTLVQKWLLEELSRLQKEEQGASWVQEEMN
YLDNEQYAKVYGMLHREKGVFGFAEKYLRLQEMLVHKRELDESDFDYAEREEELLGQMIV
KEQFRPLRRGIKRFTFIDMSGLYCQLFTDEQAYREMTGEAEMPELWPEICAQTKDKLSGQ
ELFYEDATPYLYLKELIEGVRTNTQVRHIFVDEGQDYSMFQYEFLKKLFPRARMTVLGDF
GQAIFTQATNLSGESSPLVQLYGAAETTQYQLVRSYRSTFEIVEFTKPLLPGGESIVPFE
RRGRQPVLTKLESHETKAEHIVKDLATLHAEGYTSIAVITKTAAESIEAYNLLTAGGAAE
LRLITKNTPTFEKGVQVIPAYLAKGVEFDAVLIYDASPQTYQRESERKLFYTACTRAMHV
LQLYTTGEWTPFIREVDPALYELAEH
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggagaagataagcagctgggagcaggaacaggagtggctggagcaggtaaaagaaaag
ctgaaattggggattgctaacctggagccggaggttggccggttaaaggagcaggcaaca
gatatccgcaaaagattctgggaagaggtaacggtgaataccagcacccaggaagacttc
gaggagagcttctttaccataactcagcaggatgccgtcttatccgagcgggaacgcagc
cacgcgcggaagctgcagcagtggaagaatatgaagcggctgctgccgtccccctatttc
gggcggattgattttcatgaggatggccagagtgctgaagaacaagtctatgtcggtgtc
tcctccttcgtagatacagacgggctgagctttgtggtctatgactggcgcactccgatt
gcgagcctgtactatgactatccgcctggaaaagcagccttcgacacaccgggaggacgg
atcagcggaaccatgagtctgaagcggcagtaccagatccgtaacggccagcttcagcat
ctgttcgatgcgaatgtaacgatcggcgacgaattgctgcagcaggtgctcggcaagggt
gcggatgcccaaatgaaaagtatcgtggcaaccatccaggcggaacagaacgcgatcatt
cgcaacgataacagccagatgctcattgtgcagggagcggccggcagcggcaaaacatca
gcagcgctgcagcgtgtagcttacctgctgtataaacaccgagagcggctctcggcggat
cagatcgtgctgttctcccctaacccgatgttcaacagctatgtgtctactgttctcccc
gaactgggtgaagagaatatgcagcagacgacctttcaggaatatctggaaacttggcta
agtccggaattccggcttgaagatccgtttgatcagattgaatatgtattgaccggggaa
caggacaggggttatggctcccgtcttcaggccattgagtataaggcatcggaagccttc
ctacgggcacttcagggctattcgctgtggctgaagcaagagggcatgcggtttaacgac
atctgtttcggggaccgcgtgctgatctcaggagagcagatcaagaccaggctgtatagc
tatgatccttcgattcgtctgccgaaccgcgtcaccctggtgcagaaatggctgctggaa
gagctgtccagactgcaaaaggaggagcagggagcgtcctgggtacaggaggagatgaat
tacctcgataatgagcaatacgctaaggtatacggcatgctgcacagagagaagggggtg
tttggctttgctgagaaatacctccggcttcaggaaatgctggtgcacaaacgtgagctg
gatgagagtgattttgattatgccgaacgggaggaagagctgctgggccagatgatcgtg
aaggagcagttcagacctctgagacggggaatcaagcggttcacatttatcgacatgagc
ggattatactgccagctcttcactgatgaacaggcctacagggaaatgacaggtgaagcg
gagatgccggagctttggccggagatctgtgcgcagactaaggataagctgagcgggcag
gaactcttttatgaagatgcgacaccctatttgtatttaaaagagctgatcgaaggcgtc
cggacgaatacgcaggtgcggcatattttcgttgatgagggccaggactattccatgttc
cagtatgagtttctcaaaaagctgtttccccgcgcccgtatgacggtccttggtgatttc
ggccaggcgatcttcacacaggcgacgaatctgtcaggtgagagttcaccgctggttcag
ctatatggagcggcggagactacgcagtaccagctggtgcgcagctaccgctcgacgttt
gagatcgtggagttcacgaagccgctgttgcccggcggtgagtcgattgtcccttttgag
cggagaggcagacagcctgttctaactaagctggagagccatgagacgaaggccgaacac
atagtgaaagatcttgccacgcttcacgcggaagggtacacttcaattgccgtgattacg
aagactgcggctgagagtatagaagcttataatttgttgaccgccggaggtgccgctgag
ctgcggctgatcacgaagaacacgcctacttttgagaaaggggtacaggtgattcctgct
tatctggccaaaggcgtagagttcgacgctgtgctgatctacgatgcttccccgcagacg
tatcagagggagagcgagcggaagcttttctataccgcatgtacaagggcgatgcatgtg
cttcagctgtacacgacaggggaatggacgcctttcatccgggaagtagacccggcattg
tatgaactggcggagcactaa
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