KEGG   Paenibacillus sp. FSL R5-0912: R50912_21960
Entry
R50912_21960      CDS       T03334                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
paeq  Paenibacillus sp. FSL R5-0912
Brite
KEGG Orthology (KO) [BR:paeq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:paeq03032]
    R50912_21960
   03036 Chromosome and associated proteins [BR:paeq03036]
    R50912_21960
   03400 DNA repair and recombination proteins [BR:paeq03400]
    R50912_21960
DNA replication proteins [BR:paeq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    R50912_21960
Chromosome and associated proteins [BR:paeq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    R50912_21960
DNA repair and recombination proteins [BR:paeq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      R50912_21960
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: AIQ42411
UniProt: A0A089K020
LinkDB
Position
complement(4981203..4981475)
AA seq 90 aa
MNKSDLINVVTEATELPKKDATKAVDAVFEAITGALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPSSKVPAFKPGKALKDGIK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaatcagatttgatcaacgtagttacagaagcaactgaacttcccaagaaagat
gctactaaagcggtagatgccgttttcgaagctatcacaggtgcgctgcaaagcggagat
aaagtacagctggttggattcggaaactttgaagtgcgcgaacgttccgcacgcaaaggc
cgcaacccgcagactggtgaagaaatcgaaattccttcgagcaaggtaccggcattcaaa
cccggtaaagcgctgaaagacggaatcaaatag

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