Paenibacillus sp. FSL R5-0912: R50912_23270
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Entry
R50912_23270 CDS
T03334
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
paeq
Paenibacillus sp. FSL R5-0912
Pathway
paeq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
paeq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
R50912_23270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paeq03400
]
R50912_23270
Enzymes [BR:
paeq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
R50912_23270
DNA repair and recombination proteins [BR:
paeq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
R50912_23270
Prokaryotic type
R50912_23270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIQ42646
UniProt:
A0A089K0K6
LinkDB
All DBs
Position
complement(5249228..5249896)
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AA seq
222 aa
AA seq
DB search
MFGNDWDEVLQEETHKPYFEELRYALAREYKQYTVYPPKDKLFSALKLTPYSKTRVVILG
QDPYHGAGQAHGLSFSVEPGVRIPPSLRNIYTELHNDLGVPVPNHGSLLHWAEEGVLMLN
AVLTVREGQPNSHKGLGWETFTDAIMEKLNERTEPMVFILWGSHAQLKGASIDRSRHKVI
QSPHPSPFSAHRGFLGSHPFSQANSYLESHGLTGIDWSIPNV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaatgattgggatgaggtactgcaggaagaaacgcataagccctattttgaa
gagctgcgttatgcgctggcacgtgaatataagcaatatacagtctatccgccaaaagac
aagctgttctcagcgctgaagctgacgccttacagcaagacccgggtggtcattctgggt
caggacccgtatcatggggcgggacaagctcatggcctgagtttctcggtcgagccggga
gtgcggattcctccgtcactgcgcaatatttataccgagctgcataatgatctgggcgta
cctgtgccgaaccatggttctctgctccactgggcagaagaaggggtgctgatgcttaac
gcagtgctgaccgtacgtgaaggccagccgaactcgcataaaggcctgggctgggagacg
tttacagatgccatcatggagaagctgaatgaacggacagaaccgatggtgttcatcctg
tggggcagtcatgcccagctcaaaggggcttcgattgaccgcagcaggcataaggttatt
caatctccgcatccaagtccgttctcggcccaccgcggatttctcggcagccatccgttc
tcacaggctaactcctatctggagtcgcacgggcttacaggaatcgattggtccataccg
aatgtataa
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